RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 EVCP57679 992 aa26■■□□□ 1.75
PTCD3-203ENST00000409783 MTFR1Q15390 333 aa26■■□□□ 1.75
PTCD3-203ENST00000409783 MAP3K21Q5TCX8 1036 aa26■■□□□ 1.75
PTCD3-203ENST00000409783 SRBD1Q8N5C6 995 aaKnown RBP26■■□□□ 1.75
PTCD3-203ENST00000409783 PIGSQ96S52 555 aa26■■□□□ 1.75
PTCD3-203ENST00000409783 FAM217BQ9NTX9 383 aaPredicted RBP26■■□□□ 1.75
PTCD3-203ENST00000409783 DIS3Q9Y2L1 958 aaKnown RBP26■■□□□ 1.75
PTCD3-203ENST00000409783 CCDC85CA6NKD9 419 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 NFIBO00712 420 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 ZBTB5O15062 677 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 ZBTB43O43298 467 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 GNAQP50148 359 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 FGD1P98174 961 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 OLFML2BQ68BL8 750 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 SYNE3Q6ZMZ3 975 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 TMTC3Q6ZXV5 915 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 ANKRD35Q8N283 1001 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 MAML3Q96JK9 1138 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 FGD4Q96M96 766 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 LZTS2Q9BRK4 669 aa25.99■■□□□ 1.75
PTCD3-203ENST00000409783 BIN2Q9UBW5 565 aaPredicted RBP25.99■■□□□ 1.75
PTCD3-203ENST00000409783 USH1GQ495M9 461 aa25.98■■□□□ 1.75
PTCD3-203ENST00000409783 FBXO11Q86XK2 927 aa25.98■■□□□ 1.75
PTCD3-203ENST00000409783 CMTR1Q8N1G2 835 aaKnown RBP25.98■■□□□ 1.75
PTCD3-203ENST00000409783 DDX11Q96FC9 970 aa25.98■■□□□ 1.75
PTCD3-203ENST00000409783 SLC5A4Q9NY91 659 aa25.98■■□□□ 1.75
PTCD3-203ENST00000409783 KIAA0100Q14667 2235 aaKnown RBP25.98■■□□□ 1.75
PTCD3-203ENST00000409783 NID2Q14112 1375 aa25.97■■□□□ 1.75
PTCD3-203ENST00000409783 UBXN2AP68543 259 aa25.97■■□□□ 1.75
PTCD3-203ENST00000409783 FAM133AQ8N9E0 248 aa25.97■■□□□ 1.75
PTCD3-203ENST00000409783 CYP39A1Q9NYL5 469 aa25.97■■□□□ 1.75
PTCD3-203ENST00000409783 ABCB11O95342 1321 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 PNMA6FA0A0J9YX94 578 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 MYCP01106 439 aaPredicted RBP25.96■■□□□ 1.75
PTCD3-203ENST00000409783 CCL5P13501 91 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 CDC27P30260 824 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 CACNB2Q08289 660 aaPredicted RBP25.96■■□□□ 1.75
PTCD3-203ENST00000409783 FUT2Q10981 343 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 RTN1Q16799 776 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 HOMER1Q86YM7 354 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 AMNQ9BXJ7 453 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 UNC93B1Q9H1C4 597 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 ALDH8A1Q9H2A2 487 aaPredicted RBP25.96■■□□□ 1.75
PTCD3-203ENST00000409783 PDRG1Q9NUG6 133 aa25.96■■□□□ 1.75
PTCD3-203ENST00000409783 PFASO15067 1338 aa25.95■■□□□ 1.75
PTCD3-203ENST00000409783 GOLGA8AA7E2F4 631 aa25.95■■□□□ 1.74
PTCD3-203ENST00000409783 GOLGA8BA8MQT2 603 aa25.95■■□□□ 1.74
PTCD3-203ENST00000409783 CNTN2Q02246 1040 aa25.95■■□□□ 1.74
PTCD3-203ENST00000409783 NSMFQ6X4W1 530 aa25.95■■□□□ 1.74
PTCD3-203ENST00000409783 RBM28Q9NW13 759 aaKnown RBP25.95■■□□□ 1.74
PTCD3-203ENST00000409783 MCM3APO60318 1980 aa25.95■■□□□ 1.74
PTCD3-203ENST00000409783 PRKAR2AP13861 404 aaKnown RBP25.94■■□□□ 1.74
PTCD3-203ENST00000409783 CYP2C19P33261 490 aa25.94■■□□□ 1.74
PTCD3-203ENST00000409783 RGS22Q8NE09 1264 aa25.94■■□□□ 1.74
PTCD3-203ENST00000409783 ASTN1O14525 1302 aa25.93■■□□□ 1.74
PTCD3-203ENST00000409783 CNTNAP5Q8WYK1 1306 aa25.93■■□□□ 1.74
PTCD3-203ENST00000409783 SOWAHBA6NEL2 793 aa25.93■■□□□ 1.74
PTCD3-203ENST00000409783 POTEB2H3BUK9 544 aa25.93■■□□□ 1.74
PTCD3-203ENST00000409783 OPLAHO14841 1288 aa25.93■■□□□ 1.74
PTCD3-203ENST00000409783 PDIA3P30101 505 aaKnown RBP25.93■■□□□ 1.74
PTCD3-203ENST00000409783 BAATQ14032 418 aaPredicted RBP25.93■■□□□ 1.74
PTCD3-203ENST00000409783 MFSD14CQ5VZR4 134 aa25.93■■□□□ 1.74
PTCD3-203ENST00000409783 ZNF467Q7Z7K2 595 aaPredicted RBP25.93■■□□□ 1.74
PTCD3-203ENST00000409783 TBC1D5Q92609 795 aa25.93■■□□□ 1.74
PTCD3-203ENST00000409783 KIF2CQ99661 725 aa25.93■■□□□ 1.74
PTCD3-203ENST00000409783 PCDHA1Q9Y5I3 950 aa25.93■■□□□ 1.74
PTCD3-203ENST00000409783 RPTORQ8N122 1335 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 POTEFA5A3E0 1075 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 ADD1P35611 737 aaKnown RBP25.92■■□□□ 1.74
PTCD3-203ENST00000409783 RBM25P49756 843 aaKnown RBP25.92■■□□□ 1.74
PTCD3-203ENST00000409783 METAP2P50579 478 aaKnown RBP eCLIP25.92■■□□□ 1.74
PTCD3-203ENST00000409783 PPP2R5BQ15173 497 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 MAMDC4Q6UXC1 1216 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 SLC30A10Q6XR72 485 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 CCDC82Q8N4S0 544 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 TRPV1Q8NER1 839 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 PIBF1Q8WXW3 757 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 RRP36Q96EU6 259 aaKnown RBP25.92■■□□□ 1.74
PTCD3-203ENST00000409783 PURBQ96QR8 312 aaKnown RBP25.92■■□□□ 1.74
PTCD3-203ENST00000409783 LARP6Q9BRS8 491 aaKnown RBP25.92■■□□□ 1.74
PTCD3-203ENST00000409783 TINF2Q9BSI4 451 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 PAK6Q9NQU5 681 aaPredicted RBP25.92■■□□□ 1.74
PTCD3-203ENST00000409783 NAP1L2Q9ULW6 460 aaPredicted RBP25.92■■□□□ 1.74
PTCD3-203ENST00000409783 MRPL11Q9Y3B7 192 aaKnown RBP25.92■■□□□ 1.74
PTCD3-203ENST00000409783 BRCA2P51587 3418 aa25.92■■□□□ 1.74
PTCD3-203ENST00000409783 SOX10P56693 466 aa25.91■■□□□ 1.74
PTCD3-203ENST00000409783 RNF207Q6ZRF8 634 aa25.91■■□□□ 1.74
PTCD3-203ENST00000409783 MSL3Q8N5Y2 521 aaKnown RBP25.91■■□□□ 1.74
PTCD3-203ENST00000409783 C22orf23Q9BZE7 217 aa25.91■■□□□ 1.74
PTCD3-203ENST00000409783 MAF1Q9H063 256 aa25.91■■□□□ 1.74
PTCD3-203ENST00000409783 RNF208Q9H0X6 261 aa25.91■■□□□ 1.74
PTCD3-203ENST00000409783 CYBAP13498 195 aa25.9■■□□□ 1.74
PTCD3-203ENST00000409783 CCND3P30281 292 aaPredicted RBP25.9■■□□□ 1.74
PTCD3-203ENST00000409783 RPS6P62753 249 aaKnown RBP25.9■■□□□ 1.74
PTCD3-203ENST00000409783 GHRHRQ02643 423 aa25.9■■□□□ 1.74
PTCD3-203ENST00000409783 ZNF274Q96GC6 653 aaPredicted RBP25.9■■□□□ 1.74
PTCD3-203ENST00000409783 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.9■■□□□ 1.74
PTCD3-203ENST00000409783 HMX1Q9NP08 348 aaPredicted RBP25.9■■□□□ 1.74
PTCD3-203ENST00000409783 hCG_1642624A0A1W2PR95 340 aa25.89■■□□□ 1.74
PTCD3-203ENST00000409783 PTPDC1A2A3K4 754 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms