RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PRPF3O43395 683 aaKnown RBP14.97□□□□□ -0.01
COL6A2-204ENST00000409416 APBA3O96018 575 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 RPN1P04843 607 aaKnown RBP14.97□□□□□ -0.01
COL6A2-204ENST00000409416 PLCG1P19174 1290 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 COPB1P53618 953 aaKnown RBP14.97□□□□□ -0.01
COL6A2-204ENST00000409416 HNRNPH2P55795 449 aaKnown RBP14.97□□□□□ -0.01
COL6A2-204ENST00000409416 CCDC40Q4G0X9 1142 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 CCDC155Q8N6L0 562 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 SNX29Q8TEQ0 813 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 PDE11AQ9HCR9 933 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 CD209Q9NNX6 404 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 XDHP47989 1333 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 ATRNO75882 1429 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 CTAGE15A4D2H0 777 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 TCP10L2B9ZVM9 353 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 CTAGE8P0CG41 777 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 CTAGE6Q86UF2 777 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 CTAGE4Q8IX94 777 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 RABGGTAQ92696 567 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 PANX2Q96RD6 677 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 QTRT2Q9H974 415 aaKnown RBP14.97□□□□□ -0.01
COL6A2-204ENST00000409416 RBM28Q9NW13 759 aaKnown RBP14.97□□□□□ -0.01
COL6A2-204ENST00000409416 NUP188Q5SRE5 1749 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 RNF225M0QZC1 329 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-204ENST00000409416 RPS6KA4O75676 772 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 TXNRD1Q16881 649 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 MIGA2Q7L4E1 593 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 SRGAP1Q7Z6B7 1085 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 POTEDQ86YR6 584 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 SMCR8Q8TEV9 937 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-204ENST00000409416 ZNHIT6Q9NWK9 470 aaKnown RBP14.96□□□□□ -0.01
COL6A2-204ENST00000409416 TAF1P21675 1872 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 GLI3P10071 1580 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 AKAP11Q9UKA4 1901 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 ZRANB2O95218 330 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL6A2-204ENST00000409416 AKR1B1P15121 316 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 CHRNA5P30532 468 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 IRX5P78411 483 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-204ENST00000409416 CCDC174Q6PII3 467 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 PROCA1Q8NCQ7 364 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-204ENST00000409416 WDR66Q8TBY9 1149 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 NAPGQ99747 312 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-204ENST00000409416 LRWD1Q9UFC0 647 aa14.96□□□□□ -0.01
COL6A2-204ENST00000409416 AKR1B10O60218 316 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 HSP90B2PQ58FF3 399 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 GSPT2Q8IYD1 628 aaKnown RBP14.95□□□□□ -0.02
COL6A2-204ENST00000409416 CALML4Q96GE6 196 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 IL17RBQ9NRM6 502 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 CALCOCO1Q9P1Z2 691 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 CDC23Q9UJX2 597 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 PKD1L3Q7Z443 1732 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 PSMA7O14818 248 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 BMP15O95972 392 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 CCDC122Q5T0U0 273 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 NT5DC1Q5TFE4 455 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 KRT26Q7Z3Y9 468 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 CPXCR1Q8N123 301 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 NOC4LQ9BVI4 516 aaKnown RBP14.95□□□□□ -0.02
COL6A2-204ENST00000409416 LRRC4BQ9NT99 713 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 ANKRD65E5RJM6 399 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 ERLIN1O75477 346 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 STAT3P40763 770 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 ERVK-24P63145 666 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 REXO1Q8N1G1 1221 aaKnown RBP14.95□□□□□ -0.02
COL6A2-204ENST00000409416 CEP112Q8N8E3 955 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 C6orf50Q9HD87 102 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 SMARCAL1Q9NZC9 954 aa14.95□□□□□ -0.02
COL6A2-204ENST00000409416 ARPP21Q9UBL0 812 aaPredicted RBP14.95□□□□□ -0.02
COL6A2-204ENST00000409416 MYH7P12883 1935 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 C4AP0C0L4 1744 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 C4BP0C0L5 1744 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 NPHP3-ACAD11A0A0J9YXS1 232 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 TRAF5O00463 557 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 APBA1Q02410 837 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 NFIAQ12857 509 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 PNKPQ96T60 521 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 ABHD10Q9NUJ1 306 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 TMCO5BA8MYB1 307 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 BUB1O43683 1085 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 RAD17O75943 681 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 PMS1P54277 932 aaKnown RBP14.94□□□□□ -0.02
COL6A2-204ENST00000409416 CYP26C1Q6V0L0 522 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 ABCB6Q9NP58 842 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 LUC7L2Q9Y383 392 aaKnown RBP14.94□□□□□ -0.02
COL6A2-204ENST00000409416 NONOQ15233 471 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL6A2-204ENST00000409416 TCP11X2Q5H9J9 407 aa14.94□□□□□ -0.02
COL6A2-204ENST00000409416 DCAF17Q5H9S7 520 aaPredicted RBP14.94□□□□□ -0.02
COL6A2-204ENST00000409416 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 N4BP1O75113 896 aaKnown RBP14.93□□□□□ -0.02
COL6A2-204ENST00000409416 CFBP00751 764 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 SLC1A4P43007 532 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 TMC4Q7Z404 712 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 TMTC1Q8IUR5 882 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 ZNF142P52746 1687 aaPredicted RBP14.93□□□□□ -0.02
COL6A2-204ENST00000409416 SPATA31A5Q5VU36 1347 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 SPATA31A7Q8IWB4 1347 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 USP17L10C9JJH3 530 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 GTPBP6O43824 516 aaPredicted RBP14.93□□□□□ -0.02
COL6A2-204ENST00000409416 MMP10P09238 476 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 415.4 ms