RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 IL17RBQ9NRM6 502 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 BUB1O43683 1085 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 HIBADHP31937 336 aaKnown RBP18.81■□□□□ 0.6
SYNC-202ENST00000409190 CYLC1P35663 651 aaPredicted RBP18.81■□□□□ 0.6
SYNC-202ENST00000409190 KIF5AQ12840 1032 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 PARP10Q53GL7 1025 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 SND1Q7KZF4 910 aaKnown RBP eCLIP18.81■□□□□ 0.6
SYNC-202ENST00000409190 TMC4Q7Z404 712 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 CERS3Q8IU89 383 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 TGFBRAP1Q8WUH2 860 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 UBA5Q9GZZ9 404 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 ACBD3Q9H3P7 528 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 BIN2Q9UBW5 565 aaPredicted RBP18.81■□□□□ 0.6
SYNC-202ENST00000409190 SSBP05455 408 aaKnown RBP eCLIP18.81■□□□□ 0.6
SYNC-202ENST00000409190 MUM1L1Q5H9M0 696 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 C4orf32Q8N8J7 132 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 COG1Q8WTW3 980 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 PCDHA6Q9UN73 950 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 PCDHA8Q9Y5H6 950 aa18.81■□□□□ 0.6
SYNC-202ENST00000409190 EPHB6O15197 1021 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 CYTH3O43739 400 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 CALML3P27482 149 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 EIF6P56537 245 aaKnown RBP18.8■□□□□ 0.6
SYNC-202ENST00000409190 SPA17Q15506 151 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 FAM71BQ8TC56 605 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 AFAP1L1Q8TED9 768 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 RRP36Q96EU6 259 aaKnown RBP18.8■□□□□ 0.6
SYNC-202ENST00000409190 TCP11L1Q9NUJ3 509 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 CAPN6Q9Y6Q1 641 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 CHD4Q14839 1912 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 AKR1B10O60218 316 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 KRT83P78385 493 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 SLC35G1Q2M3R5 365 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 USP17L2Q6R6M4 530 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 DUSP9Q99956 384 aaKnown RBP18.8■□□□□ 0.6
SYNC-202ENST00000409190 CAPN11Q9UMQ6 739 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 TOGARAM1Q9Y4F4 1720 aa18.8■□□□□ 0.6
SYNC-202ENST00000409190 DDX60Q8IY21 1712 aaKnown RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 PARP4Q9UKK3 1724 aaKnown RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 DDB1Q16531 1140 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 NFRKBQ6P4R8 1299 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 LRRC31Q6UY01 552 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 NLRC4Q9NPP4 1024 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.79■□□□□ 0.6
SYNC-202ENST00000409190 COL4A1P02462 1669 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 NUTM2BA6NNL0 878 aaPredicted RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 NUTM2EB1AL46 878 aaPredicted RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 KLRC4O43908 158 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 RAD21O60216 631 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 SYF2O95926 243 aaKnown RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 CT47A1Q5JQC4 288 aaPredicted RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 TTI2Q6NXR4 508 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 ZNF444Q8N0Y2 327 aaPredicted RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 SELENOOQ9BVL4 669 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 TBC1D7Q9P0N9 293 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 SRP68Q9UHB9 627 aaKnown RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 DNM2P50570 870 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 UBE4AQ14139 1066 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 GRIK5Q16478 980 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 SH3RF3Q8TEJ3 882 aaPredicted RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 SECISBP2LQ93073 1101 aaKnown RBP18.79■□□□□ 0.6
SYNC-202ENST00000409190 MTA3Q9BTC8 594 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 TAF1P21675 1872 aa18.79■□□□□ 0.6
SYNC-202ENST00000409190 ZNF142P52746 1687 aaPredicted RBP18.78■□□□□ 0.6
SYNC-202ENST00000409190 TDRD12Q587J7 1177 aaKnown RBP18.78■□□□□ 0.6
SYNC-202ENST00000409190 ZNF507Q8TCN5 953 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 TMEM260Q9NX78 707 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 MYO1AQ9UBC5 1043 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 DMGDHQ9UI17 866 aaKnown RBP18.78■□□□□ 0.6
SYNC-202ENST00000409190 HPCAL4Q9UM19 191 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 RASSF10A6NK89 507 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 ZNF263O14978 683 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 RRAGAQ7L523 313 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 P2RX5Q93086 422 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 DNAJC7Q99615 494 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 LRRC1Q9BTT6 524 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 IFIH1Q9BYX4 1025 aaKnown RBP18.78■□□□□ 0.6
SYNC-202ENST00000409190 PSMD14O00487 310 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 TRAPPC10P48553 1259 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 CCDC181Q5TID7 509 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 GLIS3Q8NEA6 775 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 ANKIB1Q9P2G1 1089 aa18.78■□□□□ 0.6
SYNC-202ENST00000409190 APBA1Q02410 837 aa18.77■□□□□ 0.6
SYNC-202ENST00000409190 ZNF804BA4D1E1 1349 aa18.77■□□□□ 0.6
SYNC-202ENST00000409190 KLRF2D3W0D1 207 aa18.77■□□□□ 0.6
SYNC-202ENST00000409190 EEF1GP26641 437 aaKnown RBP18.77■□□□□ 0.6
SYNC-202ENST00000409190 RPS8P62241 208 aaKnown RBP18.77■□□□□ 0.6
SYNC-202ENST00000409190 TUBB2AQ13885 445 aa18.77■□□□□ 0.6
SYNC-202ENST00000409190 KCTD16Q68DU8 428 aa18.77■□□□□ 0.6
SYNC-202ENST00000409190 TUBB2BQ9BVA1 445 aa18.77■□□□□ 0.6
SYNC-202ENST00000409190 PDS5AQ29RF7 1337 aaKnown RBP18.77■□□□□ 0.59
SYNC-202ENST00000409190 ESYT3A0FGR9 886 aa18.76■□□□□ 0.59
SYNC-202ENST00000409190 TULP1O00294 542 aaPredicted RBP18.76■□□□□ 0.59
SYNC-202ENST00000409190 GIMAP8Q8ND71 665 aaPredicted RBP18.76■□□□□ 0.59
SYNC-202ENST00000409190 NUP98P52948 1817 aa18.76■□□□□ 0.59
SYNC-202ENST00000409190 SMCO2A6NFE2 343 aa18.76■□□□□ 0.59
SYNC-202ENST00000409190 EIF4A3P38919 411 aaKnown RBP18.76■□□□□ 0.59
SYNC-202ENST00000409190 ARL6IP4Q66PJ3 421 aaKnown RBP18.76■□□□□ 0.59
SYNC-202ENST00000409190 CCDC47Q96A33 483 aaKnown RBP18.76■□□□□ 0.59
SYNC-202ENST00000409190 MS4A14Q96JA4 679 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms