RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 NHLH1Q02575 133 aa16.58■□□□□ 0.24
FAM3B-204ENST00000398652 C12orf60Q5U649 245 aa16.58■□□□□ 0.24
FAM3B-204ENST00000398652 DEFB128Q7Z7B8 93 aa16.58■□□□□ 0.24
FAM3B-204ENST00000398652 AMOTL1Q8IY63 956 aa16.58■□□□□ 0.24
FAM3B-204ENST00000398652 CHST13Q8NET6 341 aa16.58■□□□□ 0.24
FAM3B-204ENST00000398652 ALDH8A1Q9H2A2 487 aaPredicted RBP16.58■□□□□ 0.24
FAM3B-204ENST00000398652 ATP8A2Q9NTI2 1148 aa16.58■□□□□ 0.24
FAM3B-204ENST00000398652 SIP14410 1827 aa16.57■□□□□ 0.24
FAM3B-204ENST00000398652 CYP2D7A0A087X1C5 515 aa16.57■□□□□ 0.24
FAM3B-204ENST00000398652 KIF28PB7ZC32 967 aa16.57■□□□□ 0.24
FAM3B-204ENST00000398652 ZBED4O75132 1171 aa16.57■□□□□ 0.24
FAM3B-204ENST00000398652 HERC6Q8IVU3 1022 aa16.57■□□□□ 0.24
FAM3B-204ENST00000398652 GJD3Q8N144 294 aa16.57■□□□□ 0.24
FAM3B-204ENST00000398652 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
FAM3B-204ENST00000398652 RAVER2Q9HCJ3 691 aaKnown RBP16.57■□□□□ 0.24
FAM3B-204ENST00000398652 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
FAM3B-204ENST00000398652 CTDP1Q9Y5B0 961 aaPredicted RBP16.57■□□□□ 0.24
FAM3B-204ENST00000398652 PRKAB2O43741 272 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 SUPT20HL2P0C7V6 817 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 ALADP13716 330 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 RFC2P35250 354 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 CSPP1Q1MSJ5 1256 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 AACSQ86V21 672 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 FAM178BQ8IXR5 827 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 FAM133AQ8N9E0 248 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 UIMC1Q96RL1 719 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 KCNH6Q9H252 994 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 SLC38A10Q9HBR0 1119 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 LMCD1Q9NZU5 365 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 TRIP12Q14669 1992 aaPredicted RBP16.56■□□□□ 0.24
FAM3B-204ENST00000398652 SCN10AQ9Y5Y9 1956 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 LCTP09848 1927 aa16.56■□□□□ 0.24
FAM3B-204ENST00000398652 TNKSO95271 1327 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 USP17L12C9JPN9 530 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 USP17L21D6R901 530 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 F5H6K3 240 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 DYNC1LI2O43237 492 aaPredicted RBP16.55■□□□□ 0.24
FAM3B-204ENST00000398652 NDUFB10O96000 172 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 CYP2C9P11712 490 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 SMPD1P17405 629 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 OAZ1P54368 228 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 CNTN2Q02246 1040 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 KLRC3Q07444 240 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.55■□□□□ 0.24
FAM3B-204ENST00000398652 UBE2ZQ9H832 354 aaPredicted RBP16.55■□□□□ 0.24
FAM3B-204ENST00000398652 TRMT13Q9NUP7 481 aaKnown RBP16.55■□□□□ 0.24
FAM3B-204ENST00000398652 Q9Y3F1 56 aa16.55■□□□□ 0.24
FAM3B-204ENST00000398652 ASB14A6NK59 587 aa16.54■□□□□ 0.24
FAM3B-204ENST00000398652 MBD4O95243 580 aa16.54■□□□□ 0.24
FAM3B-204ENST00000398652 PTGS1P23219 599 aa16.54■□□□□ 0.24
FAM3B-204ENST00000398652 FXR2P51116 673 aaKnown RBP eCLIP16.54■□□□□ 0.24
FAM3B-204ENST00000398652 LEXMQ3ZCV2 418 aa16.54■□□□□ 0.24
FAM3B-204ENST00000398652 SPRED2Q7Z698 418 aa16.54■□□□□ 0.24
FAM3B-204ENST00000398652 KIFC2Q96AC6 838 aa16.54■□□□□ 0.24
FAM3B-204ENST00000398652 CLUAP1Q96AJ1 413 aa16.54■□□□□ 0.24
FAM3B-204ENST00000398652 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.53■□□□□ 0.24
FAM3B-204ENST00000398652 SSTR3P32745 418 aaPredicted RBP16.53■□□□□ 0.24
FAM3B-204ENST00000398652 IQSEC1Q6DN90 963 aa16.53■□□□□ 0.24
FAM3B-204ENST00000398652 GDPD5Q8WTR4 605 aa16.53■□□□□ 0.24
FAM3B-204ENST00000398652 FRAT1Q92837 279 aaPredicted RBP16.53■□□□□ 0.24
FAM3B-204ENST00000398652 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
FAM3B-204ENST00000398652 FBXL18Q96ME1 805 aa16.53■□□□□ 0.24
FAM3B-204ENST00000398652 C1orf115Q9H7X2 142 aa16.53■□□□□ 0.24
FAM3B-204ENST00000398652 ACAD9Q9H845 621 aa16.53■□□□□ 0.24
FAM3B-204ENST00000398652 HOMER2Q9NSB8 354 aa16.53■□□□□ 0.24
FAM3B-204ENST00000398652 NYAP2Q9P242 653 aa16.53■□□□□ 0.24
FAM3B-204ENST00000398652 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
FAM3B-204ENST00000398652 ZBED9Q6R2W3 1325 aa16.52■□□□□ 0.24
FAM3B-204ENST00000398652 SOWAHBA6NEL2 793 aa16.52■□□□□ 0.24
FAM3B-204ENST00000398652 GOLIM4O00461 696 aa16.52■□□□□ 0.24
FAM3B-204ENST00000398652 BAIAP3O94812 1187 aa16.52■□□□□ 0.24
FAM3B-204ENST00000398652 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.24
FAM3B-204ENST00000398652 TMEM57Q8N5G2 664 aa16.52■□□□□ 0.24
FAM3B-204ENST00000398652 A1CFQ9NQ94 594 aaKnown RBP16.52■□□□□ 0.24
FAM3B-204ENST00000398652 FEM1BQ9UK73 627 aa16.52■□□□□ 0.24
FAM3B-204ENST00000398652 ZNF536O15090 1300 aa16.51■□□□□ 0.23
FAM3B-204ENST00000398652 IQCF3P0C7M6 154 aa16.51■□□□□ 0.23
FAM3B-204ENST00000398652 TAPT1Q6NXT6 567 aa16.51■□□□□ 0.23
FAM3B-204ENST00000398652 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.51■□□□□ 0.23
FAM3B-204ENST00000398652 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.51■□□□□ 0.23
FAM3B-204ENST00000398652 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
FAM3B-204ENST00000398652 FTOQ9C0B1 505 aaKnown RBP eCLIP16.51■□□□□ 0.23
FAM3B-204ENST00000398652 PDGFCQ9NRA1 345 aa16.51■□□□□ 0.23
FAM3B-204ENST00000398652 POLR3EQ9NVU0 708 aa16.51■□□□□ 0.23
FAM3B-204ENST00000398652 LCHNA4D1U4 455 aa16.5■□□□□ 0.23
FAM3B-204ENST00000398652 IL9P15248 144 aa16.5■□□□□ 0.23
FAM3B-204ENST00000398652 KCNA5P22460 613 aa16.5■□□□□ 0.23
FAM3B-204ENST00000398652 ADD2P35612 726 aa16.5■□□□□ 0.23
FAM3B-204ENST00000398652 KCNJ6P48051 423 aa16.5■□□□□ 0.23
FAM3B-204ENST00000398652 GSE1Q14687 1217 aa16.5■□□□□ 0.23
FAM3B-204ENST00000398652 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
FAM3B-204ENST00000398652 FBXO16Q8IX29 292 aaPredicted RBP16.5■□□□□ 0.23
FAM3B-204ENST00000398652 RETREG2Q8NC44 543 aa16.5■□□□□ 0.23
FAM3B-204ENST00000398652 COG6Q9Y2V7 657 aa16.5■□□□□ 0.23
FAM3B-204ENST00000398652 DCXO43602 365 aa16.49■□□□□ 0.23
FAM3B-204ENST00000398652 FDX1P10109 184 aa16.49■□□□□ 0.23
FAM3B-204ENST00000398652 PURAQ00577 322 aaKnown RBP16.49■□□□□ 0.23
FAM3B-204ENST00000398652 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
FAM3B-204ENST00000398652 TMEM63BQ5T3F8 832 aa16.49■□□□□ 0.23
FAM3B-204ENST00000398652 PTCRAQ6ISU1 281 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms