RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 GTF2A2P52657 109 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 PLCB2Q00722 1185 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 TREML2Q5T2D2 321 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 RESP18Q5W5W9 173 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 ZSCAN30Q86W11 494 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 NAT10Q9H0A0 1025 aaKnown RBP20.92■□□□□ 0.94
MBD1-208ENST00000398493 VCPKMTQ9H867 229 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 FAM13BQ9NYF5 915 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 MORC2Q9Y6X9 1032 aaPredicted RBP20.92■□□□□ 0.94
MBD1-208ENST00000398493 CCL15-CCL14A0A0B4J2E2 113 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 C19orf81C9J6K1 198 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 CCL15Q16663 113 aa20.92■□□□□ 0.94
MBD1-208ENST00000398493 FAM177A1Q8N128 213 aaPredicted RBP20.92■□□□□ 0.94
MBD1-208ENST00000398493 NDUFB10O96000 172 aa20.91■□□□□ 0.94
MBD1-208ENST00000398493 GPAT2Q6NUI2 795 aa20.91■□□□□ 0.94
MBD1-208ENST00000398493 USP17L2Q6R6M4 530 aa20.91■□□□□ 0.94
MBD1-208ENST00000398493 GADL1Q6ZQY3 521 aa20.91■□□□□ 0.94
MBD1-208ENST00000398493 ZNF579Q8NAF0 562 aaKnown RBP20.91■□□□□ 0.94
MBD1-208ENST00000398493 NUP88Q99567 741 aaPredicted RBP20.91■□□□□ 0.94
MBD1-208ENST00000398493 DNAJC25Q9H1X3 360 aa20.91■□□□□ 0.94
MBD1-208ENST00000398493 KIAA1468Q9P260 1216 aa20.91■□□□□ 0.94
MBD1-208ENST00000398493 MAD2L2Q9UI95 211 aa20.91■□□□□ 0.94
MBD1-208ENST00000398493 HPSEQ9Y251 543 aa20.91■□□□□ 0.94
MBD1-208ENST00000398493 TESPA1A2RU30 521 aaPredicted RBP20.9■□□□□ 0.94
MBD1-208ENST00000398493 VCAM1P19320 739 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 PTPREP23469 700 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 MSNP26038 577 aaKnown RBP20.9■□□□□ 0.94
MBD1-208ENST00000398493 USP14P54578 494 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 NOGQ13253 232 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 PPP4R3BQ5MIZ7 849 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 SHC4Q6S5L8 630 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 GMCL1P1Q8NEA9 526 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 C12orf42Q96LP6 360 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 SH2D4AQ9H788 454 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 HOOK1Q9UJC3 728 aaKnown RBP20.9■□□□□ 0.94
MBD1-208ENST00000398493 PALM3A6NDB9 673 aaPredicted RBP20.9■□□□□ 0.94
MBD1-208ENST00000398493 GOLGA6L19H0YKK7 550 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 CETPP11597 493 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 SLFN13Q68D06 897 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 DNAJC5GQ8N7S2 189 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 PCDHB6Q9Y5E3 794 aa20.9■□□□□ 0.94
MBD1-208ENST00000398493 SRPRBQ9Y5M8 271 aaKnown RBP20.9■□□□□ 0.94
MBD1-208ENST00000398493 MANSC4A6NHS7 340 aaPredicted RBP20.89■□□□□ 0.93
MBD1-208ENST00000398493 BTBD19C9JJ37 291 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 IGF2BP3O00425 579 aaKnown RBP eCLIP20.89■□□□□ 0.93
MBD1-208ENST00000398493 PARP1P09874 1014 aaKnown RBP20.89■□□□□ 0.93
MBD1-208ENST00000398493 ATP2B1P20020 1258 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 SMARCA1P28370 1054 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 TRAPPC10P48553 1259 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 GALNT17Q6IS24 598 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 LUZP1Q86V48 1076 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 CCDC148Q8NFR7 591 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 GOPCQ9HD26 462 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 TMOD4Q9NZQ9 345 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 SYNPO2Q9UMS6 1093 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 PTPRFP10586 1907 aa20.89■□□□□ 0.93
MBD1-208ENST00000398493 MYH4Q9Y623 1939 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 CEP57L1Q8IYX8 460 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 STAG2Q8N3U4 1231 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 PROCA1Q8NCQ7 364 aaPredicted RBP20.88■□□□□ 0.93
MBD1-208ENST00000398493 CLIC6Q96NY7 704 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 KCNH3Q9ULD8 1083 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 KLRF2D3W0D1 207 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 PDHBP11177 359 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 FAM83BQ5T0W9 1011 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 FASTKD5Q7L8L6 764 aaKnown RBP20.88■□□□□ 0.93
MBD1-208ENST00000398493 ELOA2Q8IYF1 753 aaPredicted RBP20.88■□□□□ 0.93
MBD1-208ENST00000398493 PIBF1Q8WXW3 757 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 SHISA4Q96DD7 197 aa20.88■□□□□ 0.93
MBD1-208ENST00000398493 FBXO2Q9UK22 296 aaPredicted RBP20.88■□□□□ 0.93
MBD1-208ENST00000398493 BECN2A8MW95 431 aa20.87■□□□□ 0.93
MBD1-208ENST00000398493 SNHG28P0DPA3 235 aa20.87■□□□□ 0.93
MBD1-208ENST00000398493 TM4SF4P48230 202 aa20.87■□□□□ 0.93
MBD1-208ENST00000398493 SPZ1Q9BXG8 430 aa20.87■□□□□ 0.93
MBD1-208ENST00000398493 RPAP3Q9H6T3 665 aaPredicted RBP20.87■□□□□ 0.93
MBD1-208ENST00000398493 AGTPBP1Q9UPW5 1226 aa20.87■□□□□ 0.93
MBD1-208ENST00000398493 GOLGA6L6A8MZA4 724 aa20.86■□□□□ 0.93
MBD1-208ENST00000398493 GOLGA8HP0CJ92 632 aa20.86■□□□□ 0.93
MBD1-208ENST00000398493 KCTD1Q719H9 257 aa20.86■□□□□ 0.93
MBD1-208ENST00000398493 CCDC12Q8WUD4 166 aaPredicted RBP20.86■□□□□ 0.93
MBD1-208ENST00000398493 LPAR1Q92633 364 aa20.86■□□□□ 0.93
MBD1-208ENST00000398493 TNFRSF25Q93038 417 aa20.86■□□□□ 0.93
MBD1-208ENST00000398493 FERMT2Q96AC1 680 aa20.86■□□□□ 0.93
MBD1-208ENST00000398493 CCDC34Q96HJ3 373 aa20.86■□□□□ 0.93
MBD1-208ENST00000398493 FRMPD2Q68DX3 1309 aaPredicted RBP20.86■□□□□ 0.93
MBD1-208ENST00000398493 MAP2K2P36507 400 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 SLC1A4P43007 532 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 IFNL1Q8IU54 200 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 BLIDQ8IZY5 108 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 CNNM3Q8NE01 707 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 GMCL1Q96IK5 515 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 PCDHA4Q9UN74 947 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 PDHXO00330 501 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 TPM3P06753 285 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 NPY5RQ15761 445 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 TTC38Q5R3I4 469 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 TTBK2Q6IQ55 1244 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 KANK3Q6NY19 840 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 FBXO28Q9NVF7 368 aa20.85■□□□□ 0.93
MBD1-208ENST00000398493 WDR46O15213 610 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms