RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 KIF5AQ12840 1032 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 FBXO33Q7Z6M2 555 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 CLEC10AQ8IUN9 316 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ALS2CR12Q96Q35 445 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 TUBGCP2Q9BSJ2 902 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 MTA3Q9BTC8 594 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 RIC1Q4ADV7 1423 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 RNF225M0QZC1 329 aaPredicted RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ORC4O43929 436 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 VSNL1P62760 191 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ATP2C1P98194 919 aaPredicted RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 C12orf60Q5U649 245 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 WDR66Q8TBY9 1149 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 IFT81Q8WYA0 676 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 BAZ2BQ9UIF8 2168 aaKnown RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 SH3RF1Q7Z6J0 888 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ARHGEF1Q92888 912 aaKnown RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 SHISA4Q96DD7 197 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 CENPHQ9H3R5 247 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 HAUS4Q9H6D7 363 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ANAPC4Q9UJX5 808 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 AK9Q5TCS8 1911 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 PLCG1P19174 1290 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 POLR2FP61218 127 aaKnown RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 TAF3Q5VWG9 929 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ANKRD40Q6AI12 368 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 FAM196AQ6ZSG2 479 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 DGKHQ86XP1 1220 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 DHX37Q8IY37 1157 aaKnown RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 GJA10Q969M2 543 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 PKD2L1Q9P0L9 805 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ANKRD65E5RJM6 399 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 H3BQF6 201 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 TDP2O95551 362 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ATP2B4P23634 1241 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 GNA11P29992 359 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 GRAPQ13588 217 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 CCDC93Q567U6 631 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 SPOUT1Q5T280 376 aaKnown RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 GRAPLQ8TC17 118 aaPredicted RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 RABGGTAQ92696 567 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 SUGCTQ9HAC7 445 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 SMARCAL1Q9NZC9 954 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 EHD2Q9NZN4 543 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 LMTK3Q96Q04 1460 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 FAM196BA6NMK8 535 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ZBTB22O15209 634 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 NDUFA10O95299 355 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 TRAPPC10P48553 1259 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 RAPGEF1Q13905 1077 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 HSD3B7Q9H2F3 369 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 DISC1Q9NRI5 854 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ABHD10Q9NUJ1 306 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 SLURP2P0DP57 97 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 PMS1P54277 932 aaKnown RBP5.48□□□□□ -1.53
SMAD4-202ENST00000398417 GRIK5Q16478 980 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 MAATS1Q7Z4T9 603 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 C10orf67Q8IYJ2 551 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 NHEJ1Q9H9Q4 299 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-202ENST00000398417 ATP8B1O43520 1251 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 SERPINB2P05120 415 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 H2AFXP16104 143 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-202ENST00000398417 RASA1P20936 1047 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 EIF4A3P38919 411 aaKnown RBP5.48□□□□□ -1.53
SMAD4-202ENST00000398417 TCP10Q12799 353 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 TROAPQ12815 778 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 TXNRD1Q16881 649 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 SLF2Q8IX21 1173 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 MXD3Q9BW11 206 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 LRRC27Q9C0I9 530 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 CHMP2AO43633 222 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 N4BP1O75113 896 aaKnown RBP5.48□□□□□ -1.53
SMAD4-202ENST00000398417 UBXN2AP68543 259 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 PTF1AQ7RTS3 328 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 RAB34Q9BZG1 259 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 MYH10P35580 1976 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 MEIS1O00470 390 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 TUBB2AQ13885 445 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 TTC19Q6DKK2 380 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-202ENST00000398417 C2CD5Q86YS7 1000 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 TMEM139Q8IV31 216 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 KCTD17Q8N5Z5 321 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 TUBB2BQ9BVA1 445 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 FAM237AA0A1B0GTK4 181 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 FGFR1OPO95684 399 aaKnown RBP5.48□□□□□ -1.53
SMAD4-202ENST00000398417 FTCDO95954 541 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 ZNF18P17022 549 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 TTBK2Q6IQ55 1244 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 CNNM4Q6P4Q7 775 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 PNKPQ96T60 521 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 MYO18AQ92614 2054 aaKnown RBP5.48□□□□□ -1.53
SMAD4-202ENST00000398417 USP17L10C9JJH3 530 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 TBC1D8O95759 1140 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 GYPCP04921 128 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 AKR1B1P15121 316 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 MAP3K9P80192 1104 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 ASIC2Q16515 512 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 IL17AQ16552 155 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 HERC4Q5GLZ8 1057 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms