RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CEP290O15078 2479 aa16.08■□□□□ 0.17
CXCL12-205ENST00000395794 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 SOWAHBA6NEL2 793 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 DHX16O60231 1041 aaKnown RBP16.08■□□□□ 0.16
CXCL12-205ENST00000395794 GOLGA8HP0CJ92 632 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 ASPRV1Q53RT3 343 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 IFIT1BQ5T764 474 aaKnown RBP16.08■□□□□ 0.16
CXCL12-205ENST00000395794 KIAA1211Q6ZU35 1233 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 RALYLQ86SE5 291 aaKnown RBP16.08■□□□□ 0.16
CXCL12-205ENST00000395794 NUP133Q8WUM0 1156 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.16
CXCL12-205ENST00000395794 FGD4Q96M96 766 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 MPHOSPH6Q99547 160 aaKnown RBP16.08■□□□□ 0.16
CXCL12-205ENST00000395794 UBE2OQ9C0C9 1292 aaKnown RBP16.08■□□□□ 0.16
CXCL12-205ENST00000395794 IL25Q9H293 177 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 SYNRGQ9UMZ2 1314 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 FRMPD3Q5JV73 1810 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 PLXNA1Q9UIW2 1896 aa16.08■□□□□ 0.16
CXCL12-205ENST00000395794 ERICH2A1L162 156 aa16.07■□□□□ 0.16
CXCL12-205ENST00000395794 PARP1P09874 1014 aaKnown RBP16.07■□□□□ 0.16
CXCL12-205ENST00000395794 C6orf222P0C671 652 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-205ENST00000395794 BAATQ14032 418 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-205ENST00000395794 PCSK9Q8NBP7 692 aaKnown RBP16.07■□□□□ 0.16
CXCL12-205ENST00000395794 UBA5Q9GZZ9 404 aa16.07■□□□□ 0.16
CXCL12-205ENST00000395794 PRDM5Q9NQX1 630 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-205ENST00000395794 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
CXCL12-205ENST00000395794 A0A1W2PQ45 241 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-205ENST00000395794 A0A1W2PQY0 241 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 B4DLN1 442 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 SGSM2O43147 1006 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 ADAMTS4O75173 837 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 MRPL12P52815 198 aaKnown RBP16.06■□□□□ 0.16
CXCL12-205ENST00000395794 ACLYP53396 1101 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 MDM2Q00987 491 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-205ENST00000395794 TNFAIP2Q03169 654 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 PTH1RQ03431 593 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 SART3Q15020 963 aaKnown RBP16.06■□□□□ 0.16
CXCL12-205ENST00000395794 TRIM60Q495X7 471 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 C1orf53Q5VUE5 145 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 RNF207Q6ZRF8 634 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 CENPQQ7L2Z9 268 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-205ENST00000395794 VTI1AQ96AJ9 217 aa16.06■□□□□ 0.16
CXCL12-205ENST00000395794 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 NFIBO00712 420 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 CYP21A2P08686 494 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 CALML3P27482 149 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 SNX17Q15036 470 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
CXCL12-205ENST00000395794 KCNA10Q16322 511 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 USH1GQ495M9 461 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 GNASQ5JWF2 1037 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 NCOA7Q8NI08 942 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 GLT1D1Q96MS3 346 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 AP5M1Q9H0R1 490 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 STARD7Q9NQZ5 370 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 ALPK3Q96L96 1907 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
CXCL12-205ENST00000395794 IFIT3O14879 490 aaKnown RBP16.04■□□□□ 0.16
CXCL12-205ENST00000395794 CST5P28325 142 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-205ENST00000395794 GJA9P57773 515 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 CDC37Q16543 378 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-205ENST00000395794 IQSEC1Q6DN90 963 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 EEPD1Q7L9B9 569 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 ADGRF4Q8IZF3 695 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 TDHQ8IZJ6 230 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 KLHDC9Q8NEP7 349 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 CLEC4DQ8WXI8 215 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 KATNBL1Q9H079 304 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 VAT1LQ9HCJ6 419 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 VTA1Q9NP79 307 aa16.04■□□□□ 0.16
CXCL12-205ENST00000395794 ABCB11O95342 1321 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 DCDC2CA8MYV0 355 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 E7EWF7 191 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 ZEB2O60315 1214 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 PQBP1O60828 265 aaKnown RBP16.03■□□□□ 0.16
CXCL12-205ENST00000395794 ALDH5A1P51649 535 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-205ENST00000395794 TLE2Q04725 743 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 PDE4DQ08499 809 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 CYB5R4Q7L1T6 521 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 MCF2L2Q86YR7 1114 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 FBXO16Q8IX29 292 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-205ENST00000395794 RGS22Q8NE09 1264 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 MAP4K1Q92918 833 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 MAF1Q9H063 256 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 UPF3AQ9H1J1 476 aaKnown RBP16.03■□□□□ 0.16
CXCL12-205ENST00000395794 CPVLQ9H3G5 476 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 PCDH10Q9P2E7 1040 aa16.03■□□□□ 0.16
CXCL12-205ENST00000395794 ELP1O95163 1332 aa16.02■□□□□ 0.16
CXCL12-205ENST00000395794 ASGR1P07306 291 aa16.02■□□□□ 0.16
CXCL12-205ENST00000395794 RPS6P62753 249 aaKnown RBP16.02■□□□□ 0.16
CXCL12-205ENST00000395794 WTAPQ15007 396 aa16.02■□□□□ 0.16
CXCL12-205ENST00000395794 SEC23AQ15436 765 aa16.02■□□□□ 0.16
CXCL12-205ENST00000395794 SLC30A10Q6XR72 485 aa16.02■□□□□ 0.16
CXCL12-205ENST00000395794 TLK2Q86UE8 772 aa16.02■□□□□ 0.16
CXCL12-205ENST00000395794 FBXO11Q86XK2 927 aa16.02■□□□□ 0.16
CXCL12-205ENST00000395794 DNERQ8NFT8 737 aa16.02■□□□□ 0.16
CXCL12-205ENST00000395794 MORC4Q8TE76 937 aa16.02■□□□□ 0.16
CXCL12-205ENST00000395794 PURBQ96QR8 312 aaKnown RBP16.02■□□□□ 0.16
CXCL12-205ENST00000395794 MRPL11Q9Y3B7 192 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms