RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 TSPY8P0CW00 308 aa18.66■□□□□ 0.58
SIPA1-201ENST00000394224 NPY5RQ15761 445 aa18.66■□□□□ 0.58
SIPA1-201ENST00000394224 CADPS2Q86UW7 1296 aa18.66■□□□□ 0.58
SIPA1-201ENST00000394224 TGFBRAP1Q8WUH2 860 aa18.66■□□□□ 0.58
SIPA1-201ENST00000394224 HGSO14964 777 aaPredicted RBP18.66■□□□□ 0.58
SIPA1-201ENST00000394224 GUCY1A3Q02108 690 aa18.66■□□□□ 0.58
SIPA1-201ENST00000394224 GUCY2DQ02846 1103 aa18.66■□□□□ 0.58
SIPA1-201ENST00000394224 BRINP3Q76B58 766 aa18.66■□□□□ 0.58
SIPA1-201ENST00000394224 SPATA20Q8TB22 786 aa18.66■□□□□ 0.58
SIPA1-201ENST00000394224 NWD2Q9ULI1 1742 aa18.66■□□□□ 0.58
SIPA1-201ENST00000394224 MYO5AQ9Y4I1 1855 aaKnown RBP18.65■□□□□ 0.58
SIPA1-201ENST00000394224 MARF1Q9Y4F3 1742 aaKnown RBP18.65■□□□□ 0.58
SIPA1-201ENST00000394224 POTEMA6NI47 508 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 EXOC5O00471 708 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 NDUFAB1O14561 156 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 SEC24CP53992 1094 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 SPAG1Q07617 926 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 OR2W6PQ8NHA6 318 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 HAUS4Q9H6D7 363 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 TCP11L1Q9NUJ3 509 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 RAB21Q9UL25 225 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 BCS1LQ9Y276 419 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 RTL9Q8NET4 1388 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 GNAT2P19087 354 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 FGFR2P21802 821 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 MUM1L1Q5H9M0 696 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 CABP7Q86V35 215 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 JRKLQ9Y4A0 524 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 WDR19Q8NEZ3 1342 aa18.65■□□□□ 0.58
SIPA1-201ENST00000394224 ZNF263O14978 683 aa18.64■□□□□ 0.58
SIPA1-201ENST00000394224 TRAPPC11Q7Z392 1133 aa18.64■□□□□ 0.58
SIPA1-201ENST00000394224 PPANQ9NQ55 473 aaKnown RBP18.64■□□□□ 0.58
SIPA1-201ENST00000394224 CRKLP46109 303 aaKnown RBP18.64■□□□□ 0.57
SIPA1-201ENST00000394224 KRT83P78385 493 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 AMPD2Q01433 879 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 EHHADHQ08426 723 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 TSEN2Q8NCE0 465 aaKnown RBP18.64■□□□□ 0.57
SIPA1-201ENST00000394224 LIMA1Q9UHB6 759 aaKnown RBP18.64■□□□□ 0.57
SIPA1-201ENST00000394224 LMO7Q8WWI1 1683 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 LGALS16A8MUM7 142 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 MAGEA1P43355 309 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 NAALADL2Q58DX5 795 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 NAA35Q5VZE5 725 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 SH3RF1Q7Z6J0 888 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 ZNF384Q8TF68 577 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 ANKIB1Q9P2G1 1089 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 HYOU1Q9Y4L1 999 aa18.64■□□□□ 0.57
SIPA1-201ENST00000394224 EBAG9O00559 213 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 KCNQ2O43526 872 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 NOP2P46087 812 aaKnown RBP18.63■□□□□ 0.57
SIPA1-201ENST00000394224 CNTNAP5Q8WYK1 1306 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 FUT2Q10981 343 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 ODF2Q5BJF6 829 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 COA7Q96BR5 231 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 CCDC43Q96MW1 224 aaKnown RBP18.63■□□□□ 0.57
SIPA1-201ENST00000394224 EPB41L5Q9HCM4 733 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 SALL4Q9UJQ4 1053 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 LRRC53A6NM62 1247 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 H7C1D1 291 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 FAM153BP0C7A2 387 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 FAM153CQ494X1 144 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 ADSSL1Q8N142 457 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 CAPS2Q9BXY5 557 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 RMND1Q9NWS8 449 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 FAM153AQ9UHL3 310 aa18.63■□□□□ 0.57
SIPA1-201ENST00000394224 TMCO5BA8MYB1 307 aa18.62■□□□□ 0.57
SIPA1-201ENST00000394224 ECM2O94769 699 aaPredicted RBP18.62■□□□□ 0.57
SIPA1-201ENST00000394224 ALX1Q15699 326 aa18.62■□□□□ 0.57
SIPA1-201ENST00000394224 C8orf74Q6P047 294 aa18.62■□□□□ 0.57
SIPA1-201ENST00000394224 DDX42Q86XP3 938 aaKnown RBP eCLIP18.62■□□□□ 0.57
SIPA1-201ENST00000394224 ZNF444Q8N0Y2 327 aaPredicted RBP18.62■□□□□ 0.57
SIPA1-201ENST00000394224 UHMK1Q8TAS1 419 aaKnown RBP18.62■□□□□ 0.57
SIPA1-201ENST00000394224 DCP1AQ9NPI6 582 aaPredicted RBP18.62■□□□□ 0.57
SIPA1-201ENST00000394224 RBM12Q9NTZ6 932 aaKnown RBP18.62■□□□□ 0.57
SIPA1-201ENST00000394224 TNNI2P48788 182 aa18.62■□□□□ 0.57
SIPA1-201ENST00000394224 PICALMQ13492 652 aa18.62■□□□□ 0.57
SIPA1-201ENST00000394224 KRT12Q99456 494 aa18.62■□□□□ 0.57
SIPA1-201ENST00000394224 LOC102724159A0A0B4J2E5 919 aa18.62■□□□□ 0.57
SIPA1-201ENST00000394224 SLC1A4P43007 532 aa18.62■□□□□ 0.57
SIPA1-201ENST00000394224 CARSP49589 748 aaKnown RBP18.62■□□□□ 0.57
SIPA1-201ENST00000394224 TRIM28Q13263 835 aaKnown RBP18.62■□□□□ 0.57
SIPA1-201ENST00000394224 PWP2Q15269 919 aaKnown RBP18.62■□□□□ 0.57
SIPA1-201ENST00000394224 CAPN7Q9Y6W3 813 aa18.62■□□□□ 0.57
SIPA1-201ENST00000394224 OVOS2A0A0G2JMS6 1433 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 TACC1O75410 805 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 RAPGEF1Q13905 1077 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 CCDC40Q4G0X9 1142 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 RIOK1Q9BRS2 568 aaKnown RBP18.61■□□□□ 0.57
SIPA1-201ENST00000394224 MYO1FO00160 1098 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 USO1O60763 962 aaKnown RBP18.61■□□□□ 0.57
SIPA1-201ENST00000394224 PAFAH1B1P43034 410 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 IRAK1P51617 712 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 KIF11P52732 1056 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 CCNI2Q6ZMN8 369 aaPredicted RBP18.61■□□□□ 0.57
SIPA1-201ENST00000394224 GPCPD1Q9NPB8 672 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 FAM169AQ9Y6X4 670 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 SPATA4Q8NEY3 305 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 HNRNPLLQ8WVV9 542 aaKnown RBP18.61■□□□□ 0.57
SIPA1-201ENST00000394224 AP1M1Q9BXS5 423 aa18.61■□□□□ 0.57
SIPA1-201ENST00000394224 PCDHA13Q9Y5I0 950 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms