RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 ZNF449Q6P9G9 518 aa17.7■□□□□ 0.42
TFAP2B-202ENST00000393655 KRT10P13645 584 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 ABCB4P21439 1286 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 MAP7D3Q8IWC1 876 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 PFKFB2O60825 505 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 DALRD3Q5D0E6 543 aaKnown RBP17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 TRIM58Q8NG06 486 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 SSH3Q8TE77 659 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 SLC7A3Q8WY07 619 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 RPGRIP1Q96KN7 1286 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 ZNF577Q9BSK1 485 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 TMEM94Q12767 1356 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 GARSP41250 739 aaKnown RBP17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 MFAP3P55082 362 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 RNASELQ05823 741 aaKnown RBP17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 GREM2Q9H772 168 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 hCG_1984214I3L0E3 225 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 PDE8BO95263 885 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 ZNF713Q8N859 430 aaPredicted RBP17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 TRIML1Q8N9V2 468 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 CACTINQ8WUQ7 758 aaKnown RBP17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 ARHGEF2Q92974 986 aaKnown RBP17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 SNX25Q9H3E2 840 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 FAM114A2Q9NRY5 505 aa17.69■□□□□ 0.42
TFAP2B-202ENST00000393655 PFKFB1P16118 471 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 LMNB1P20700 586 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 ANAPC5Q9UJX4 755 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 ZNF215Q9UL58 517 aaPredicted RBP17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 IFNB1P01574 187 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 SRGAP2BP0DMP2 458 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 GAP43P17677 238 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 GPIHBP1Q8IV16 184 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 SLC12A6Q9UHW9 1150 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 ADAM9Q13443 819 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 LRRC24Q50LG9 513 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 SEPT14Q6ZU15 432 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 PPM1KQ8N3J5 372 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 RILPQ96NA2 401 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 ABT1Q9ULW3 272 aaKnown RBP17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 ADCY8P40145 1251 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 NSFP46459 744 aaKnown RBP17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 SH2D4BQ5SQS7 431 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 BBOF1Q8ND07 529 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 DHX36Q9H2U1 1008 aaKnown RBP17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 DISC1Q9NRI5 854 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 CFAP43Q8NDM7 1665 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 ZNF233A6NK53 670 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 NDUFAB1O14561 156 aa17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 TROVE2P10155 538 aaKnown RBP eCLIP17.68■□□□□ 0.42
TFAP2B-202ENST00000393655 MYL7Q01449 175 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 FAM26FQ5R3K3 315 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 ANKRD20A3Q5VUR7 823 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 SCYL1Q96KG9 808 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 GPR108Q9NPR9 543 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 TYW1Q9NV66 732 aaKnown RBP17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 OGFRQ9NZT2 677 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 NPHP4O75161 1426 aaPredicted RBP17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 FAM135BQ49AJ0 1406 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 KCNQ3O43525 872 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 TTC31Q49AM3 519 aaPredicted RBP17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 OR8K1Q8NGG5 319 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 PSMB7Q99436 277 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 CARD6Q9BX69 1037 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 WDR11Q9BZH6 1224 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 KRT3P12035 628 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 PTK2Q05397 1052 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 KIAA1841Q6NSI8 718 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 RTKN2Q8IZC4 609 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 IL17REQ8NFR9 667 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 FAM81BQ96LP2 452 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 CUEDC2Q9H467 287 aa17.67■□□□□ 0.42
TFAP2B-202ENST00000393655 ODR4Q5SWX8 454 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 CCDC127Q96BQ5 260 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 HNRNPDLO14979 420 aaKnown RBP17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 RPN1P04843 607 aaKnown RBP17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 KIF9Q9HAQ2 790 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 EIF3CLB5ME19 914 aaKnown RBP17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 ME3Q16798 604 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 PPP1R2P3Q6NXS1 205 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 RSRC2Q7L4I2 434 aaKnown RBP17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 TRIM11Q96F44 468 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 EIF3CQ99613 913 aaKnown RBP17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 BFSP1Q12934 665 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 LMNTD2Q8IXW0 634 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 SKA2Q8WVK7 121 aaPredicted RBP17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 EDC3Q96F86 508 aaKnown RBP17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 RUNDC3BQ96NL0 473 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 NT5C1BQ96P26 610 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 ACCSQ96QU6 501 aa17.66■□□□□ 0.42
TFAP2B-202ENST00000393655 MYOM2P54296 1465 aa17.65■□□□□ 0.42
TFAP2B-202ENST00000393655 A0A0D9SFI3 127 aa17.65■□□□□ 0.42
TFAP2B-202ENST00000393655 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
TFAP2B-202ENST00000393655 GSTA1P08263 222 aa17.65■□□□□ 0.42
TFAP2B-202ENST00000393655 GSTA2P09210 222 aa17.65■□□□□ 0.42
TFAP2B-202ENST00000393655 GTF2A1P52655 376 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms