RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 ATL2Q8NHH9 583 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 PANK1Q8TE04 598 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 TCTN2Q96GX1 697 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 C1orf159Q96HA4 380 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 FCRL3Q96P31 734 aaPredicted RBP4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 ORAI3Q9BRQ5 295 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 TARS2Q9BW92 718 aaKnown RBP4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 LGR4Q9BXB1 951 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 PCGF6Q9BYE7 350 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 SLC52A2Q9HAB3 445 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 TCRBV16S1A1N1A0A5B0 115 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 C1QTNF9BB2RNN3 333 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 MEFVO15553 781 aaPredicted RBP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 ZEB2O60315 1214 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 DNAJC8O75937 253 aaPredicted RBP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 LTBRP36941 435 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 SCNN1BP51168 640 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 CLCN7P51798 805 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 GTF2A2P52657 109 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 OXCT1P55809 520 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 GPR85P60893 370 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 NFIAQ12857 509 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 FAPQ12884 760 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 KCNAB2Q13303 367 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 SF1Q15637 639 aaKnown RBP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 CFAP100Q494V2 611 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 RNF219Q5W0B1 726 aaPredicted RBP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 ZNF765Q7L2R6 523 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 TMPRSS7Q7RTY8 843 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 BRAPQ7Z569 592 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 DDX42Q86XP3 938 aaKnown RBP eCLIP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 FBXL6Q8N531 539 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 PRPF38AQ8NAV1 312 aaKnown RBP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 KREMEN2Q8NCW0 462 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 LEO1Q8WVC0 666 aaPredicted RBP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 SYTL4Q96C24 671 aaPredicted RBP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 WNK4Q96J92 1243 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 DCAF5Q96JK2 942 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 MFSD14AQ96MC6 490 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 MMP19Q99542 508 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 DBNDD2Q9BQY9 259 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 ALG1Q9BT22 464 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 SLC12A9Q9BXP2 914 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 OSBPL1AQ9BXW6 950 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 IRF2BPLQ9H1B7 796 aa4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 TNPO3Q9Y5L0 923 aaKnown RBP4.05□□□□□ -1.76
TRAJ40-201ENST00000390497 TMEM265A0A087WTH1 108 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 FAM170BA6NMN3 283 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 PRR33A8MZF0 331 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 MEIS1O00470 390 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 MARCH6O60337 910 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 ZNF205O95201 554 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 CRTAMO95727 393 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 S100BP04271 92 aaPredicted RBP4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 THBDP07204 575 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 CD3EP07766 207 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 GSTM1P09488 218 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 H2AFB1P0C5Y9 115 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 H2AFB2P0C5Z0 115 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 PAMP19021 973 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 TPP2P29144 1249 aaPredicted RBP4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 CTSKP43235 329 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 GUCY1A3Q02108 690 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 PAK1Q13153 545 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 SART3Q15020 963 aaKnown RBP4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 NTRK3Q16288 839 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 PLEKHG6Q3KR16 790 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 CCDC181Q5TID7 509 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 CDCA2Q69YH5 1023 aaPredicted RBP4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 PPIL6Q8IXY8 311 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 AFAP1L2Q8N4X5 818 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 NPLOC4Q8TAT6 608 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 FRS2Q8WU20 508 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 DIO2Q92813 273 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 SCLYQ96I15 445 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 GPRC5CQ9NQ84 441 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 TCFL5Q9UL49 500 aa4.04□□□□□ -1.76
TRAJ40-201ENST00000390497 NPHP3-ACAD11A0A0J9YXS1 232 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 SHISA3A0PJX4 238 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 BLACEA4D250 179 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 STXBP3O00186 592 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 MYO1BO43795 1136 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 EYA4O95677 639 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 IGLV1-40P01703 118 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 F13BP05160 661 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 SYPP08247 313 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 JMJD7P0C870 316 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 POU3F3P20264 500 aaPredicted RBP4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 CHRNA4P43681 627 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 IFI16Q16666 785 aaKnown RBP4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 NKPD1Q17RQ9 610 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 PRSS53Q2L4Q9 553 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 KIZQ2M2Z5 673 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 CDKAL1Q5VV42 579 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 HLA-DQA1Q5Y7H0 255 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 ZCCHC8Q6NZY4 707 aaKnown RBP4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 CRTC3Q6UUV7 619 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 CYP2R1Q6VVX0 501 aa4.03□□□□□ -1.76
TRAJ40-201ENST00000390497 LBX2Q6XYB7 198 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms