RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 PPP2R5EQ16537 467 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 PLEKHN1Q494U1 663 aaPredicted RBP5.71□□□□□ -1.5
TRAV40-201ENST00000390467 HEATR6Q6AI08 1181 aaKnown RBP5.71□□□□□ -1.5
TRAV40-201ENST00000390467 CYP2R1Q6VVX0 501 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 ZNF513Q8N8E2 541 aaPredicted RBP5.71□□□□□ -1.5
TRAV40-201ENST00000390467 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 EPB41L4AQ9HCS5 686 aaPredicted RBP5.71□□□□□ -1.5
TRAV40-201ENST00000390467 SIRT5Q9NXA8 310 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 APEX2Q9UBZ4 518 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 CGGBP1Q9UFW8 167 aaPredicted RBP5.71□□□□□ -1.5
TRAV40-201ENST00000390467 PLA2G2DQ9UNK4 145 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 INPP5FQ9Y2H2 1132 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 ADAMTS20P59510 1910 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 N4BP3O15049 544 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 VAMP4O75379 141 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 TACR1P25103 407 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 POU4F1Q01851 419 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 HLA-DQA1Q5Y7H0 255 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 JAMLQ86YT9 394 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 IGDCC3Q8IVU1 814 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 ANAPC16Q96DE5 110 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 SEC16BQ96JE7 1060 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 SIGLEC10Q96LC7 697 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 GBP3Q9H0R5 595 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 CCSER2Q9H7U1 834 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 FBLN5Q9UBX5 448 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 DIS3Q9Y2L1 958 aaKnown RBP5.7□□□□□ -1.5
TRAV40-201ENST00000390467 HCFC2Q9Y5Z7 792 aa5.7□□□□□ -1.5
TRAV40-201ENST00000390467 AURKAO14965 403 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 DBHP09172 617 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 NCKAP1LP55160 1127 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 CASP7P55210 303 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 CBX2Q14781 532 aaPredicted RBP5.69□□□□□ -1.5
TRAV40-201ENST00000390467 DPY19L1Q2PZI1 675 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 RCSD1Q6JBY9 416 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 KIAA1211LQ6NV74 962 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 VHLLQ6RSH7 139 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 LDHDQ86WU2 507 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 TMEFF1Q8IYR6 380 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 MZB1Q8WU39 189 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 CPLX3Q8WVH0 158 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 PCDHA5Q9Y5H7 936 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 IRAK3Q9Y616 596 aa5.69□□□□□ -1.5
TRAV40-201ENST00000390467 ABLIM1O14639 778 aa5.68□□□□□ -1.5
TRAV40-201ENST00000390467 INHBBP09529 407 aa5.68□□□□□ -1.5
TRAV40-201ENST00000390467 NOP2P46087 812 aaKnown RBP5.68□□□□□ -1.5
TRAV40-201ENST00000390467 ZNF200P98182 395 aaPredicted RBP5.68□□□□□ -1.5
TRAV40-201ENST00000390467 OLFML2BQ68BL8 750 aa5.68□□□□□ -1.5
TRAV40-201ENST00000390467 TTLL10Q6ZVT0 673 aa5.68□□□□□ -1.5
TRAV40-201ENST00000390467 ADAT2Q7Z6V5 191 aaKnown RBP5.68□□□□□ -1.5
TRAV40-201ENST00000390467 ARHGEF39Q8N4T4 335 aa5.68□□□□□ -1.5
TRAV40-201ENST00000390467 DACT3Q96B18 629 aaPredicted RBP5.68□□□□□ -1.5
TRAV40-201ENST00000390467 ZNF428Q96B54 188 aa5.68□□□□□ -1.5
TRAV40-201ENST00000390467 LGR4Q9BXB1 951 aa5.68□□□□□ -1.5
TRAV40-201ENST00000390467 A0A1W2PQ27 194 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 A0A1W2PQ64 194 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 A0A1W2PQC6 194 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 A0A1W2PQD8 194 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 RFXAPO00287 272 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 SRGAP3O43295 1099 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 TRIM13O60858 407 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 PPM1BO75688 479 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 ATF4P18848 351 aaPredicted RBP5.67□□□□□ -1.5
TRAV40-201ENST00000390467 FBLN1P23142 703 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 EEF1DP3Q658K8 133 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 PDLIM7Q9NR12 457 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 STRIP2Q9ULQ0 834 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 BACE2Q9Y5Z0 518 aa5.67□□□□□ -1.5
TRAV40-201ENST00000390467 B2RBV5 119 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 CYBBP04839 570 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 IGFBP6P24592 240 aaPredicted RBP5.66□□□□□ -1.5
TRAV40-201ENST00000390467 L1CAMP32004 1257 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 MAPKAPK2P49137 400 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 CORO7P57737 925 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 GRB10Q13322 594 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 TCERG1LQ5VWI1 586 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 BICRALQ6AI39 1079 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 RCC1LQ96I51 464 aaKnown RBP5.66□□□□□ -1.5
TRAV40-201ENST00000390467 RXFP1Q9HBX9 757 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 SUGT1Q9Y2Z0 365 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 MRVI1Q9Y6F6 885 aa5.66□□□□□ -1.5
TRAV40-201ENST00000390467 ANKRD34BA5PLL1 514 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 C2orf71A6NGG8 1288 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 SMAD7O15105 426 aaKnown RBP5.65□□□□□ -1.5
TRAV40-201ENST00000390467 PPP1R11O60927 126 aaPredicted RBP5.65□□□□□ -1.5
TRAV40-201ENST00000390467 TBC1D8O95759 1140 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 BMP7P18075 431 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 ERCC5P28715 1186 aaPredicted RBP5.65□□□□□ -1.5
TRAV40-201ENST00000390467 AMPD2Q01433 879 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 TMEM62Q0P6H9 643 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 VMACQ2NL98 169 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 MBLAC2Q68D91 279 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 ZC3H14Q6PJT7 736 aaKnown RBP5.65□□□□□ -1.5
TRAV40-201ENST00000390467 PAQR3Q6TCH7 311 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 FAM129CQ86XR2 697 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 EMC9Q9Y3B6 208 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 RWDD3Q9Y3V2 267 aa5.65□□□□□ -1.5
TRAV40-201ENST00000390467 ZC3H12DA2A288 527 aaKnown RBP5.64□□□□□ -1.51
TRAV40-201ENST00000390467 KCNH1O95259 989 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms