RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 KIAA1683Q9H0B3 1180 aa13.9□□□□□ -0.18
SPTBN1-203ENST00000389980 EMILIN3Q9NT22 766 aa13.9□□□□□ -0.18
SPTBN1-203ENST00000389980 ZHX2Q9Y6X8 837 aa13.9□□□□□ -0.18
SPTBN1-203ENST00000389980 PHIPQ8WWQ0 1821 aa13.9□□□□□ -0.18
SPTBN1-203ENST00000389980 VWA3AA6NCI4 1184 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 POTECB2RU33 542 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 IL17AQ16552 155 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 C4orf32Q8N8J7 132 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 CHURC1Q8WUH1 139 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 TMEM60Q9H2L4 133 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 TSPY26PQ9H489 355 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 GINM1Q9NU53 330 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 HPSEQ9Y251 543 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 CCNT1O60563 726 aaKnown RBP13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 MRPL12P52815 198 aaKnown RBP13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 USP50Q70EL3 339 aaPredicted RBP13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 RNF214Q8ND24 703 aa13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.89□□□□□ -0.19
SPTBN1-203ENST00000389980 EDIL3O43854 480 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 VCAM1P19320 739 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 CLCN1P35523 988 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 SYKP43405 635 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 CLK2P49760 499 aaKnown RBP13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 NEK8Q86SG6 692 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 EPSTI1Q96J88 318 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 FUCA2Q9BTY2 467 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 TANGO6Q9C0B7 1094 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 TAF1DQ9H5J8 278 aaPredicted RBP13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 FEM1BQ9UK73 627 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 KCNH3Q9ULD8 1083 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 A0A087WWV3 80 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 OPLAHO14841 1288 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 WDR46O15213 610 aaKnown RBP13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 BMP15O95972 392 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 HMGCS2P54868 508 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 BACE1P56817 501 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 RBM43Q6ZSC3 357 aaKnown RBP13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 MOB2Q70IA6 237 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 PDILTQ8N807 584 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 P2RX7Q99572 595 aaKnown RBP13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 SDF4Q9BRK5 362 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 WDR18Q9BV38 432 aa13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 RANBP17Q9H2T7 1088 aaKnown RBP13.88□□□□□ -0.19
SPTBN1-203ENST00000389980 OTOFQ9HC10 1997 aa13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 MEIS2O14770 477 aa13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 POTEIP0CG38 1075 aa13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 VGLL4Q14135 290 aa13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 FAM160B2Q86V87 743 aa13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 LPAR1Q92633 364 aa13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 RPAP3Q9H6T3 665 aaPredicted RBP13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 SCN4AP35499 1836 aa13.87□□□□□ -0.19
SPTBN1-203ENST00000389980 FAM237AA0A1B0GTK4 181 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 PLA2G6O60733 806 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 TDP2O95551 362 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 HOXA13P31271 388 aaPredicted RBP13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 LONRF3Q496Y0 759 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 TBC1D5Q92609 795 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 SYMPKQ92797 1274 aaKnown RBP13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 FERMT2Q96AC1 680 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 CDCA5Q96FF9 252 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 AS3MTQ9HBK9 375 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 SNCAIPQ9Y6H5 919 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 ZC3H4Q9UPT8 1303 aaKnown RBP13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 A0A087X0B3 334 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 POLR2DO15514 142 aaKnown RBP13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 FLOT1O75955 427 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 CDC25AP30304 524 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 MAP3K9P80192 1104 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 AGBL1Q96MI9 1066 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 SLF1Q9BQI6 1058 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 FAM13BQ9NYF5 915 aa13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 MORC2Q9Y6X9 1032 aaPredicted RBP13.86□□□□□ -0.19
SPTBN1-203ENST00000389980 PPP1R12BO60237 982 aaPredicted RBP13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 USP14P54578 494 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 TYRO3Q06418 890 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 NOL9Q5SY16 702 aaKnown RBP13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 ZC3H15Q8WU90 426 aaKnown RBP13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 PARP14Q460N5 1801 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 SLC37A4O43826 429 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 FMR1Q06787 632 aaKnown RBP eCLIP13.85□□□□□ -0.198e-7■■■■■ 30.4
SPTBN1-203ENST00000389980 LDHDQ86WU2 507 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 CPXCR1Q8N123 301 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 WNK4Q96J92 1243 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 UIMC1Q96RL1 719 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 ANO3Q9BYT9 981 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 AFG3L2Q9Y4W6 797 aa13.85□□□□□ -0.19
SPTBN1-203ENST00000389980 ZNF536O15090 1300 aa13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 IQCA1LA6NCM1 817 aa13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 CTAGE5O15320 804 aa13.84□□□□□ -0.19
SPTBN1-203ENST00000389980 FOXN1O15353 648 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms