RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 JMYQ8N9B5 988 aa30.63■■■□□ 2.49
MSX1-201ENST00000382723 IRF6O14896 467 aa30.62■■■□□ 2.49
MSX1-201ENST00000382723 LIG1P18858 919 aa30.62■■■□□ 2.49
MSX1-201ENST00000382723 SPDYE5A6NIY4 337 aa30.61■■■□□ 2.49
MSX1-201ENST00000382723 MCM7P33993 719 aa30.61■■■□□ 2.49
MSX1-201ENST00000382723 TRAF1Q13077 416 aa30.61■■■□□ 2.49
MSX1-201ENST00000382723 CCAR1Q8IX12 1150 aaKnown RBP30.61■■■□□ 2.49
MSX1-201ENST00000382723 GLT8D2Q9H1C3 349 aa30.61■■■□□ 2.49
MSX1-201ENST00000382723 TMEM63CQ9P1W3 806 aa30.61■■■□□ 2.49
MSX1-201ENST00000382723 MRVI1Q9Y6F6 885 aa30.61■■■□□ 2.49
MSX1-201ENST00000382723 CLK2P49760 499 aaKnown RBP30.61■■■□□ 2.49
MSX1-201ENST00000382723 ADALQ6DHV7 355 aa30.61■■■□□ 2.49
MSX1-201ENST00000382723 TBCKQ8TEA7 893 aa30.61■■■□□ 2.49
MSX1-201ENST00000382723 CTDP1Q9Y5B0 961 aaPredicted RBP30.61■■■□□ 2.49
MSX1-201ENST00000382723 LDLRAD1Q5T700 205 aa30.6■■■□□ 2.49
MSX1-201ENST00000382723 OPTNQ96CV9 577 aa30.6■■■□□ 2.49
MSX1-201ENST00000382723 AGBL1Q96MI9 1066 aa30.6■■■□□ 2.49
MSX1-201ENST00000382723 CPXCR1Q8N123 301 aa30.59■■■□□ 2.49
MSX1-201ENST00000382723 ATG4CQ96DT6 458 aa30.59■■■□□ 2.49
MSX1-201ENST00000382723 SLC38A10Q9HBR0 1119 aa30.59■■■□□ 2.49
MSX1-201ENST00000382723 CCPG1Q9ULG6 757 aa30.59■■■□□ 2.49
MSX1-201ENST00000382723 OPLAHO14841 1288 aa30.59■■■□□ 2.49
MSX1-201ENST00000382723 ICAM1P05362 532 aa30.59■■■□□ 2.49
MSX1-201ENST00000382723 AXDND1Q5T1B0 1012 aaPredicted RBP30.59■■■□□ 2.49
MSX1-201ENST00000382723 CLIC6Q96NY7 704 aa30.59■■■□□ 2.49
MSX1-201ENST00000382723 ZNF536O15090 1300 aa30.59■■■□□ 2.49
MSX1-201ENST00000382723 LETM2Q2VYF4 491 aa30.58■■■□□ 2.49
MSX1-201ENST00000382723 GADL1Q6ZQY3 521 aa30.58■■■□□ 2.49
MSX1-201ENST00000382723 CATSPERGQ6ZRH7 1159 aa30.58■■■□□ 2.49
MSX1-201ENST00000382723 GOLPH3LQ9H4A5 285 aa30.58■■■□□ 2.49
MSX1-201ENST00000382723 RAVER2Q9HCJ3 691 aaKnown RBP30.58■■■□□ 2.49
MSX1-201ENST00000382723 MEIS2O14770 477 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 ZBED4O75132 1171 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 CELF2O95319 508 aaKnown RBP30.57■■■□□ 2.48
MSX1-201ENST00000382723 PPIL2Q13356 520 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 TREML2Q5T2D2 321 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 KRI1Q8N9T8 703 aaKnown RBP30.57■■■□□ 2.48
MSX1-201ENST00000382723 FSIP1Q8NA03 581 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 SLC10A4Q96EP9 437 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 WNK4Q96J92 1243 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 BMP15O95972 392 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 PTGDRQ13258 359 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 COG2Q14746 738 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 NEK8Q86SG6 692 aa30.57■■■□□ 2.48
MSX1-201ENST00000382723 MRPL11Q9Y3B7 192 aaKnown RBP30.57■■■□□ 2.48
MSX1-201ENST00000382723 A0A1W2PQ27 194 aa30.56■■■□□ 2.48
MSX1-201ENST00000382723 A0A1W2PQ64 194 aa30.56■■■□□ 2.48
MSX1-201ENST00000382723 A0A1W2PQD8 194 aa30.56■■■□□ 2.48
MSX1-201ENST00000382723 VWA5AO00534 786 aa30.56■■■□□ 2.48
MSX1-201ENST00000382723 SYAP1Q96A49 352 aaPredicted RBP30.56■■■□□ 2.48
MSX1-201ENST00000382723 GBA2Q9HCG7 927 aaPredicted RBP30.56■■■□□ 2.48
MSX1-201ENST00000382723 FBXO2Q9UK22 296 aaPredicted RBP30.56■■■□□ 2.48
MSX1-201ENST00000382723 ABCB11O95342 1321 aa30.55■■■□□ 2.48
MSX1-201ENST00000382723 A0A0G2JLL6 359 aaPredicted RBP30.55■■■□□ 2.48
MSX1-201ENST00000382723 CXCL11O14625 94 aa30.55■■■□□ 2.48
MSX1-201ENST00000382723 CCNT1O60563 726 aaKnown RBP30.55■■■□□ 2.48
MSX1-201ENST00000382723 HOXA13P31271 388 aaPredicted RBP30.55■■■□□ 2.48
MSX1-201ENST00000382723 DSG3P32926 999 aa30.55■■■□□ 2.48
MSX1-201ENST00000382723 PRRT2Q7Z6L0 340 aaPredicted RBP30.55■■■□□ 2.48
MSX1-201ENST00000382723 MRPS27Q92552 414 aaKnown RBP30.55■■■□□ 2.48
MSX1-201ENST00000382723 CUTAO60888 179 aa30.55■■■□□ 2.48
MSX1-201ENST00000382723 NR1I2O75469 434 aa30.55■■■□□ 2.48
MSX1-201ENST00000382723 GRIN1Q05586 938 aa30.55■■■□□ 2.48
MSX1-201ENST00000382723 DACT1Q9NYF0 836 aa30.55■■■□□ 2.48
MSX1-201ENST00000382723 A0A1B0GVL5 298 aa30.54■■■□□ 2.48
MSX1-201ENST00000382723 CFBP00751 764 aa30.54■■■□□ 2.48
MSX1-201ENST00000382723 PTPREP23469 700 aa30.54■■■□□ 2.48
MSX1-201ENST00000382723 CCDC73Q6ZRK6 1079 aa30.54■■■□□ 2.48
MSX1-201ENST00000382723 KCNH4Q9UQ05 1017 aa30.54■■■□□ 2.48
MSX1-201ENST00000382723 ATP2C1P98194 919 aaPredicted RBP30.53■■■□□ 2.48
MSX1-201ENST00000382723 ZSCAN23Q3MJ62 389 aa30.53■■■□□ 2.48
MSX1-201ENST00000382723 C2orf69Q8N8R5 385 aa30.53■■■□□ 2.48
MSX1-201ENST00000382723 TBC1D5Q92609 795 aa30.53■■■□□ 2.48
MSX1-201ENST00000382723 SRPRBQ9Y5M8 271 aaKnown RBP30.53■■■□□ 2.48
MSX1-201ENST00000382723 FDX1P10109 184 aa30.53■■■□□ 2.48
MSX1-201ENST00000382723 ALAS1P13196 640 aa30.53■■■□□ 2.48
MSX1-201ENST00000382723 CHADLQ6NUI6 762 aa30.53■■■□□ 2.48
MSX1-201ENST00000382723 P2RX7Q99572 595 aaKnown RBP30.53■■■□□ 2.48
MSX1-201ENST00000382723 ANO3Q9BYT9 981 aa30.53■■■□□ 2.48
MSX1-201ENST00000382723 HOMER2Q9NSB8 354 aa30.53■■■□□ 2.48
MSX1-201ENST00000382723 GJA5P36382 358 aa30.52■■■□□ 2.48
MSX1-201ENST00000382723 FKBP1BP68106 108 aa30.52■■■□□ 2.48
MSX1-201ENST00000382723 SPECC1Q5M775 1068 aa30.52■■■□□ 2.48
MSX1-201ENST00000382723 SHC4Q6S5L8 630 aa30.52■■■□□ 2.48
MSX1-201ENST00000382723 CMA1P23946 247 aa30.51■■■□□ 2.48
MSX1-201ENST00000382723 AP3B2Q13367 1082 aa30.51■■■□□ 2.48
MSX1-201ENST00000382723 CCDC183Q5T5S1 534 aa30.51■■■□□ 2.48
MSX1-201ENST00000382723 PROCA1Q8NCQ7 364 aaPredicted RBP30.51■■■□□ 2.48
MSX1-201ENST00000382723 HOXC10Q9NYD6 342 aa30.51■■■□□ 2.48
MSX1-201ENST00000382723 SPDYE3A6NKU9 549 aa30.51■■■□□ 2.47
MSX1-201ENST00000382723 NDUFA8P51970 172 aa30.51■■■□□ 2.47
MSX1-201ENST00000382723 C4orf32Q8N8J7 132 aa30.51■■■□□ 2.47
MSX1-201ENST00000382723 GCOM1H8Y6P7 765 aaPredicted RBP30.5■■■□□ 2.47
MSX1-201ENST00000382723 POLR2MP0CAP2 368 aa30.5■■■□□ 2.47
MSX1-201ENST00000382723 FCHSD1Q86WN1 690 aa30.5■■■□□ 2.47
MSX1-201ENST00000382723 ADAMTS5Q9UNA0 930 aa30.5■■■□□ 2.47
MSX1-201ENST00000382723 MORC2Q9Y6X9 1032 aaPredicted RBP30.5■■■□□ 2.47
MSX1-201ENST00000382723 UNCXA6NJT0 531 aa30.49■■■□□ 2.47
MSX1-201ENST00000382723 SPDYE16A6NNV3 312 aaPredicted RBP30.49■■■□□ 2.47
MSX1-201ENST00000382723 PIK3CDO00329 1044 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms