RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SLC15A5A6NIM6 579 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 IFIT3O14879 490 aaKnown RBP10.81□□□□□ -0.68
HMGN1-202ENST00000380747 GOLGA8HP0CJ92 632 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 PDHBP11177 359 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 SLC16A2P36021 539 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 RGS2P41220 211 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 SNAP25P60880 206 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 MAP2K5Q13163 448 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 LRIT3Q3SXY7 679 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 MORN1Q5T089 497 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 SNRNP48Q6IEG0 339 aaKnown RBP10.81□□□□□ -0.68
HMGN1-202ENST00000380747 CCDC174Q6PII3 467 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 NECAB2Q7Z6G3 386 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 RIOX2Q8IUF8 465 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 REPS2Q8NFH8 660 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 ANKS1AQ92625 1134 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 DEFB118Q96PH6 123 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 TEX13BQ9BXU2 312 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 SLC38A10Q9HBR0 1119 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 ZNF214Q9UL59 606 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-202ENST00000380747 PRR12Q9ULL5 1215 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 A0A0G2JMZ2 1700 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 MGAMO43451 1857 aa10.81□□□□□ -0.68
HMGN1-202ENST00000380747 GPR37O15354 613 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 PLA2G6O60733 806 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 REC8O95072 547 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 TFRCP02786 760 aaKnown RBP10.8□□□□□ -0.68
HMGN1-202ENST00000380747 FDX1P10109 184 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 COPB2P35606 906 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 ZNF543Q08ER8 600 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 WTAPQ15007 396 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 SART3Q15020 963 aaKnown RBP10.8□□□□□ -0.68
HMGN1-202ENST00000380747 SEC23AQ15436 765 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 TMEM67Q5HYA8 995 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 SYDE2Q5VT97 1194 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 DPP9Q86TI2 863 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 MB21D2Q8IYB1 491 aaPredicted RBP10.8□□□□□ -0.68
HMGN1-202ENST00000380747 MMP19Q99542 508 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 APBA2Q99767 749 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 STXBP5LQ9Y2K9 1186 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 RLFQ13129 1914 aa10.8□□□□□ -0.68
HMGN1-202ENST00000380747 EYSQ5T1H1 3165 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 PRC1O43663 620 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 STRNO43815 780 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 SNHG28P0DPA3 235 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 FCER1AP12319 257 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 XRCC5P13010 732 aaKnown RBP10.79□□□□□ -0.68
HMGN1-202ENST00000380747 ZKSCAN1P17029 563 aaPredicted RBP10.79□□□□□ -0.68
HMGN1-202ENST00000380747 ADORA2AP29274 412 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 ANTXR2P58335 489 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 GRB14Q14449 540 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 KCTD2Q14681 263 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 BTNL9Q6UXG8 535 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 KRI1Q8N9T8 703 aaKnown RBP10.79□□□□□ -0.68
HMGN1-202ENST00000380747 TRIB2Q92519 343 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 USP6NLQ92738 828 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 PAWRQ96IZ0 340 aaKnown RBP10.79□□□□□ -0.68
HMGN1-202ENST00000380747 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 RIPK3Q9Y572 518 aa10.79□□□□□ -0.68
HMGN1-202ENST00000380747 PRUNE2Q8WUY3 3088 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 ATP2A1O14983 1001 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 DHX16O60231 1041 aaKnown RBP10.78□□□□□ -0.68
HMGN1-202ENST00000380747 HMGCRP04035 888 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 PARP1P09874 1014 aaKnown RBP10.78□□□□□ -0.68
HMGN1-202ENST00000380747 MCM5P33992 734 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 OAZ1P54368 228 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 TRIM32Q13049 653 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 CCL14Q16627 93 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 GPATCH4Q5T3I0 446 aaKnown RBP10.78□□□□□ -0.68
HMGN1-202ENST00000380747 NFXL1Q6ZNB6 911 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 TRMT44Q8IYL2 757 aaKnown RBP10.78□□□□□ -0.68
HMGN1-202ENST00000380747 DEFB123Q8N688 67 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 NPLOC4Q8TAT6 608 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 NEK1Q96PY6 1258 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 UBA5Q9GZZ9 404 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.78□□□□□ -0.684e-10■■■■□ 24
HMGN1-202ENST00000380747 RANBP17Q9H2T7 1088 aaKnown RBP10.78□□□□□ -0.68
HMGN1-202ENST00000380747 CPVLQ9H3G5 476 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 SENP2Q9HC62 589 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 SCUBE2Q9NQ36 999 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 HOMER2Q9NSB8 354 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 PARP14Q460N5 1801 aa10.78□□□□□ -0.68
HMGN1-202ENST00000380747 COBLO75128 1261 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 PGK2P07205 417 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 ALAS1P13196 640 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 COL9A3Q14050 684 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-202ENST00000380747 KRT32Q14532 448 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 ASPRV1Q53RT3 343 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 CATIPQ7Z7H3 387 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 ABRAQ8N0Z2 381 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 IGDCC4Q8TDY8 1250 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 NUP133Q8WUM0 1156 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 DDX11Q96FC9 970 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 TMEM87BQ96K49 555 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 LRRC2Q9BYS8 371 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 VAT1LQ9HCJ6 419 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 RNF146Q9NTX7 359 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 SLC5A4Q9NY91 659 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 FBXO40Q9UH90 709 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 CCPG1Q9ULG6 757 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms