RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 EEF1GP26641 437 aaKnown RBP17.59■□□□□ 0.41
COL2A1-202ENST00000380518 APBA1Q02410 837 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 EXOC3L4Q17RC7 722 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 CCDC17Q96LX7 622 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 MIS12Q9H081 205 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 TTLL3Q9Y4R7 772 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 BZW2Q9Y6E2 419 aaKnown RBP17.59■□□□□ 0.41
COL2A1-202ENST00000380518 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
COL2A1-202ENST00000380518 CASP14P31944 242 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 MAN1A1P33908 653 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 GPATCH4Q5T3I0 446 aaKnown RBP17.59■□□□□ 0.41
COL2A1-202ENST00000380518 EPSTI1Q96J88 318 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 AK8Q96MA6 479 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 DPH5Q9H2P9 285 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 TYW1Q9NV66 732 aaKnown RBP17.59■□□□□ 0.41
COL2A1-202ENST00000380518 BAIAP2L1Q9UHR4 511 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 BSPRYQ5W0U4 402 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 KIAA0825Q8IV33 1275 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 IGSF1Q8N6C5 1336 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 TNNC2P02585 160 aa17.58■□□□□ 0.41
COL2A1-202ENST00000380518 USP21Q9UK80 565 aa17.58■□□□□ 0.41
COL2A1-202ENST00000380518 CASQ2O14958 399 aaPredicted RBP17.58■□□□□ 0.41
COL2A1-202ENST00000380518 SF3A3Q12874 501 aaKnown RBP eCLIP17.58■□□□□ 0.411e-7■■■□□ 16.1
COL2A1-202ENST00000380518 SPATS2Q86XZ4 545 aaKnown RBP17.58■□□□□ 0.41
COL2A1-202ENST00000380518 SMCR8Q8TEV9 937 aaPredicted RBP17.58■□□□□ 0.41
COL2A1-202ENST00000380518 DHTKD1Q96HY7 919 aaPredicted RBP17.58■□□□□ 0.41
COL2A1-202ENST00000380518 BCAP29Q9UHQ4 241 aa17.58■□□□□ 0.41
COL2A1-202ENST00000380518 AFG3L2Q9Y4W6 797 aa17.58■□□□□ 0.41
COL2A1-202ENST00000380518 POLR2BP30876 1174 aaKnown RBP17.58■□□□□ 0.4
COL2A1-202ENST00000380518 GJA10Q969M2 543 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 HAUS1Q96CS2 278 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 AMNQ9BXJ7 453 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 PYCARDQ9ULZ3 195 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 VPS41P49754 854 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 SCNN1DP51172 638 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 GABPAQ06546 454 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 DCAF15Q66K64 600 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 FLAD1Q8NFF5 587 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 CCDC127Q96BQ5 260 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 RCOR1Q9UKL0 485 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 RABGAP1Q9Y3P9 1069 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 CSADQ9Y600 493 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 MLH3Q9UHC1 1453 aa17.58■□□□□ 0.4
COL2A1-202ENST00000380518 IL6STP40189 918 aaPredicted RBP17.57■□□□□ 0.4
COL2A1-202ENST00000380518 KRT81Q14533 505 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 ANKRD13CQ8N6S4 541 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 LARP4BQ92615 738 aaKnown RBP17.57■□□□□ 0.4
COL2A1-202ENST00000380518 TMEM232C9JQI7 657 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 ZNF589Q86UQ0 364 aaPredicted RBP17.57■□□□□ 0.4
COL2A1-202ENST00000380518 RETREG2Q8NC44 543 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 BBOF1Q8ND07 529 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 FAM71BQ8TC56 605 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 CAPS2Q9BXY5 557 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 LOC102724428A0A0B4J2F2 783 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 STAM2O75886 525 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 SIK1P57059 783 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 CYP4A11Q02928 519 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 ASPRV1Q53RT3 343 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 SEPT14Q6ZU15 432 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 RNF10Q8N5U6 811 aaKnown RBP17.57■□□□□ 0.4
COL2A1-202ENST00000380518 KIAA1024Q9UPX6 916 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 DMP1Q13316 513 aaPredicted RBP17.57■□□□□ 0.4
COL2A1-202ENST00000380518 DPCR1Q3MIW9 517 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 METTL13Q8N6R0 699 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 PCDHA4Q9UN74 947 aa17.57■□□□□ 0.4
COL2A1-202ENST00000380518 DLATP10515 647 aaKnown RBP17.56■□□□□ 0.4
COL2A1-202ENST00000380518 ODR4Q5SWX8 454 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 CCDC13Q8IYE1 715 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.56■□□□□ 0.4
COL2A1-202ENST00000380518 PPP1R13BQ96KQ4 1090 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 ADPGKQ9BRR6 497 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 ATG3Q9NT62 314 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 FAM170AA1A519 330 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 THAP12O43422 761 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 ATF7P17544 494 aaPredicted RBP17.56■□□□□ 0.4
COL2A1-202ENST00000380518 KIF23Q02241 960 aaPredicted RBP17.56■□□□□ 0.4
COL2A1-202ENST00000380518 EHHADHQ08426 723 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 BCAS4Q8TDM0 211 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL2A1-202ENST00000380518 HESX1Q9UBX0 185 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
COL2A1-202ENST00000380518 SOS2Q07890 1332 aaPredicted RBP17.56■□□□□ 0.4
COL2A1-202ENST00000380518 ATP1A2P50993 1020 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 PTPROQ16827 1216 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 LINC00301Q8NCQ3 95 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 NSFP46459 744 aaKnown RBP17.56■□□□□ 0.4
COL2A1-202ENST00000380518 PPP2R5CQ13362 524 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 SCYL2Q6P3W7 929 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 PLCD3Q8N3E9 789 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 MIPOL1Q8TD10 442 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 LEMD3Q9Y2U8 911 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 ZNF521Q96K83 1311 aa17.56■□□□□ 0.4
COL2A1-202ENST00000380518 SLFN14P0C7P3 912 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 BPIFB4P59827 614 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 POLA2Q14181 598 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 TRIM50Q86XT4 487 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 ATP10DQ9P241 1426 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 PASKQ96RG2 1323 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 APBA3O96018 575 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms