RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 YARSP54577 528 aaKnown RBP16.31■□□□□ 0.2
EXT1-201ENST00000378204 SKOR1P84550 965 aa16.31■□□□□ 0.2
EXT1-201ENST00000378204 SUFUQ9UMX1 484 aa16.31■□□□□ 0.2
EXT1-201ENST00000378204 GUCY2FP51841 1108 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 EIF4A1P60842 406 aaKnown RBP16.3■□□□□ 0.2
EXT1-201ENST00000378204 LRMPQ12912 555 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 DNAJC10Q8IXB1 793 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 SMCR8Q8TEV9 937 aaPredicted RBP16.3■□□□□ 0.2
EXT1-201ENST00000378204 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 CMA1P23946 247 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 PSDA5PKW4 1024 aaPredicted RBP16.3■□□□□ 0.2
EXT1-201ENST00000378204 LIG4P49917 911 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 IFNL3Q8IZI9 196 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 USP40Q9NVE5 1235 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 SLC5A4Q9NY91 659 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 OR52Z1P0C646 297 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 KRT26Q7Z3Y9 468 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 NEK8Q86SG6 692 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 ZBTB8OSQ8IWT0 167 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 FANCBQ8NB91 859 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 DMP1Q13316 513 aaPredicted RBP16.3■□□□□ 0.2
EXT1-201ENST00000378204 FAM102BQ5T8I3 360 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 PNMA1Q8ND90 353 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 SERPINI2O75830 405 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 TRIM50Q86XT4 487 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 MED23Q9ULK4 1368 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 PPP1R12AO14974 1030 aaPredicted RBP16.3■□□□□ 0.2
EXT1-201ENST00000378204 FBXO41Q8TF61 875 aa16.3■□□□□ 0.2
EXT1-201ENST00000378204 MRPL11Q9Y3B7 192 aaKnown RBP16.3■□□□□ 0.2
EXT1-201ENST00000378204 CAPN9O14815 690 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
EXT1-201ENST00000378204 EFCAB8A8MWE9 144 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 ADCY8P40145 1251 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 GPIHBP1Q8IV16 184 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 NBPF3Q9H094 633 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 COL4A3BPQ9Y5P4 624 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 TESPA1A2RU30 521 aaPredicted RBP16.29■□□□□ 0.2
EXT1-201ENST00000378204 PDE6CP51160 858 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 LRRC8AQ8IWT6 810 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 AS3MTQ9HBK9 375 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 PNMA2Q9UL42 364 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 KDRP35968 1356 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 EVI5O60447 810 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 PDZD4Q76G19 769 aaPredicted RBP16.29■□□□□ 0.2
EXT1-201ENST00000378204 SSH3Q8TE77 659 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.22e-7■■■■■ 31.9
EXT1-201ENST00000378204 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 HNRNPCP07910 306 aaKnown RBP eCLIP16.29■□□□□ 0.27e-7■■□□□ 13.6
EXT1-201ENST00000378204 GNGT1P63211 74 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 PLCB4Q15147 1175 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 CCDC13Q8IYE1 715 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 ADPGKQ9BRR6 497 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 HAUS4Q9H6D7 363 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 MYO5CQ9NQX4 1742 aa16.29■□□□□ 0.2
EXT1-201ENST00000378204 THAP12O43422 761 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 PFKFB2O60825 505 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 SKIP12755 728 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 POLR2BP30876 1174 aaKnown RBP16.28■□□□□ 0.2
EXT1-201ENST00000378204 ZBTB38Q8NAP3 1195 aaPredicted RBP16.28■□□□□ 0.2
EXT1-201ENST00000378204 CSADQ9Y600 493 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 STAM2O75886 525 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 TNNC2P02585 160 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 SCG2P13521 617 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 GTF2IP78347 998 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 INSRP06213 1382 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 PPARDQ03181 441 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 ANKRD42Q8N9B4 389 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 HSPD1P10809 573 aaKnown RBP16.28■□□□□ 0.2
EXT1-201ENST00000378204 ATF7P17544 494 aaPredicted RBP16.28■□□□□ 0.2
EXT1-201ENST00000378204 GDAP1L1Q96MZ0 367 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 CHUKO15111 745 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 GTPBP6O43824 516 aaPredicted RBP16.28■□□□□ 0.2
EXT1-201ENST00000378204 MAGEF1Q9HAY2 307 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 BZW2Q9Y6E2 419 aaKnown RBP16.28■□□□□ 0.2
EXT1-201ENST00000378204 GFM2Q969S9 779 aaKnown RBP16.28■□□□□ 0.2
EXT1-201ENST00000378204 DRC3Q9H069 523 aa16.28■□□□□ 0.2
EXT1-201ENST00000378204 USP44Q9H0E7 712 aa16.27■□□□□ 0.2
EXT1-201ENST00000378204 BLMP54132 1417 aaPredicted RBP16.27■□□□□ 0.2
EXT1-201ENST00000378204 PPIP5K2O43314 1243 aa16.27■□□□□ 0.2
EXT1-201ENST00000378204 RPN1P04843 607 aaKnown RBP16.27■□□□□ 0.2
EXT1-201ENST00000378204 LONP1P36776 959 aaKnown RBP16.27■□□□□ 0.2
EXT1-201ENST00000378204 SPATA1Q5VX52 437 aa16.27■□□□□ 0.2
EXT1-201ENST00000378204 PBRM1Q86U86 1689 aa16.27■□□□□ 0.2
EXT1-201ENST00000378204 ATP7AQ04656 1500 aa16.27■□□□□ 0.2
EXT1-201ENST00000378204 A0A0D9SFI3 127 aa16.27■□□□□ 0.2
EXT1-201ENST00000378204 TRIM37O94972 964 aa16.27■□□□□ 0.2
EXT1-201ENST00000378204 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.27■□□□□ 0.2
EXT1-201ENST00000378204 TSC1Q92574 1164 aa16.27■□□□□ 0.2
EXT1-201ENST00000378204 MLXIPQ9HAP2 919 aa16.27■□□□□ 0.2
EXT1-201ENST00000378204 K7ENM7 598 aa16.27■□□□□ 0.19
EXT1-201ENST00000378204 PDE6AP16499 860 aa16.27■□□□□ 0.19
EXT1-201ENST00000378204 CCHCR1Q8TD31 782 aa16.27■□□□□ 0.19
EXT1-201ENST00000378204 PPP2R2CQ9Y2T4 447 aa16.27■□□□□ 0.19
EXT1-201ENST00000378204 PFDN6O15212 129 aa16.27■□□□□ 0.19
EXT1-201ENST00000378204 FGAP02671 866 aa16.27■□□□□ 0.19
EXT1-201ENST00000378204 POLR2MP0CAP2 368 aa16.27■□□□□ 0.19
EXT1-201ENST00000378204 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.19
EXT1-201ENST00000378204 LMNB2Q03252 620 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms