RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 CCDC170Q8IYT3 715 aa11.3□□□□□ -0.6
USP11-203ENST00000377080 TXLNBQ8N3L3 684 aa11.3□□□□□ -0.6
USP11-203ENST00000377080 MB21D1Q8N884 522 aa11.3□□□□□ -0.6
USP11-203ENST00000377080 ZNF507Q8TCN5 953 aa11.3□□□□□ -0.6
USP11-203ENST00000377080 MTRQ99707 1265 aa11.3□□□□□ -0.6
USP11-203ENST00000377080 NAPGQ99747 312 aaPredicted RBP11.3□□□□□ -0.6
USP11-203ENST00000377080 SPZ1Q9BXG8 430 aa11.3□□□□□ -0.6
USP11-203ENST00000377080 DISC1Q9NRI5 854 aa11.3□□□□□ -0.6
USP11-203ENST00000377080 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
USP11-203ENST00000377080 EPN1Q9Y6I3 576 aaPredicted RBP11.3□□□□□ -0.6
USP11-203ENST00000377080 MYH8P13535 1937 aa11.3□□□□□ -0.6
USP11-203ENST00000377080 ABCB11O95342 1321 aa11.3□□□□□ -0.6
USP11-203ENST00000377080 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 A0A1W2PQJ5 194 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 ESYT2A0FGR8 921 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 TSPY2A6NKD2 308 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 PSMA7O14818 248 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 PRDM1O75626 825 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 ARHGAP25P42331 645 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 NOVP48745 357 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 FXR1P51114 621 aaKnown RBP eCLIP11.29□□□□□ -0.6
USP11-203ENST00000377080 AMPD3Q01432 767 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 GOLGA8FQ08AF8 430 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 GOLGA8DPQ0D2H9 430 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
USP11-203ENST00000377080 MEA1Q16626 185 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
USP11-203ENST00000377080 KLHL10Q6JEL2 608 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 CNNM4Q6P4Q7 775 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 EXOC4Q96A65 974 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 C7orf25Q9BPX7 421 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 VIPAS39Q9H9C1 493 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 BARHL2Q9NY43 387 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
USP11-203ENST00000377080 COL4A1P02462 1669 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 POTECB2RU33 542 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 POLRMTO00411 1230 aaKnown RBP11.28□□□□□ -0.6
USP11-203ENST00000377080 WNT7AO00755 349 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 NPHP1O15259 732 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 SLC26A4O43511 780 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 KLRC4O43908 158 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 ZPR1O75312 459 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 EIF3JO75822 258 aaKnown RBP11.28□□□□□ -0.6
USP11-203ENST00000377080 PARP1P09874 1014 aaKnown RBP11.28□□□□□ -0.6
USP11-203ENST00000377080 SRGNP10124 158 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 KRT9P35527 623 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 UBA7P41226 1012 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 PRCPP42785 496 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 RGS19P49795 217 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 AMPD2Q01433 879 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 TFAP4Q01664 338 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 MTF1Q14872 753 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 LONRF2Q1L5Z9 754 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 KIF4BQ2VIQ3 1234 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 ZNF569Q5MCW4 686 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 IRF2BP1Q8IU81 584 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 PNMA1Q8ND90 353 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 RUBCNQ92622 972 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
USP11-203ENST00000377080 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 EDEM3Q9BZQ6 932 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 LRRC27Q9C0I9 530 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 ZNHIT6Q9NWK9 470 aaKnown RBP11.28□□□□□ -0.6
USP11-203ENST00000377080 WBP1LQ9NX94 342 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 MAGEC2Q9UBF1 373 aaPredicted RBP11.28□□□□□ -0.6
USP11-203ENST00000377080 PCDHA6Q9UN73 950 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 LUC7L2Q9Y383 392 aaKnown RBP11.28□□□□□ -0.6
USP11-203ENST00000377080 PCDHA8Q9Y5H6 950 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 MYH1P12882 1939 aa11.28□□□□□ -0.6
USP11-203ENST00000377080 CYP2D7A0A087X1C5 515 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 ANO9A1A5B4 782 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 TARSL2A2RTX5 802 aaKnown RBP11.27□□□□□ -0.61
USP11-203ENST00000377080 CTAGE15A4D2H0 777 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 NDUFA10O95299 355 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 CTAGE8P0CG41 777 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 PRLRP16471 622 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 PLCG2P16885 1265 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 CCNE1P24864 410 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 GNA11P29992 359 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 HNRNPH3P31942 346 aaKnown RBP11.27□□□□□ -0.61
USP11-203ENST00000377080 MCM7P33993 719 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 VEGFBP49765 207 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 STX17P56962 302 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 ERVK-24P63145 666 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 ITIH3Q06033 890 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 NAALADL2Q58DX5 795 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 MUM1L1Q5H9M0 696 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 BEND6Q5SZJ8 279 aaPredicted RBP11.27□□□□□ -0.61
USP11-203ENST00000377080 PAPD7Q5XG87 772 aaKnown RBP11.27□□□□□ -0.61
USP11-203ENST00000377080 DPY19L2Q6NUT2 758 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 CTAGE6Q86UF2 777 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 ZSCAN29Q8IWY8 852 aaPredicted RBP11.27□□□□□ -0.61
USP11-203ENST00000377080 CTAGE4Q8IX94 777 aa11.27□□□□□ -0.61
USP11-203ENST00000377080 FAM163AQ96GL9 167 aaPredicted RBP11.27□□□□□ -0.61
USP11-203ENST00000377080 ERGIC2Q96RQ1 377 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms