RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 COBLO75128 1261 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 ALAS1P13196 640 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 ADORA2AP29274 412 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 RABEP1Q15276 862 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 MUM1L1Q5H9M0 696 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 WDR78Q5VTH9 848 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 FBXO11Q86XK2 927 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 PXYLP1Q8TE99 480 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 MMP19Q99542 508 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 LARP6Q9BRS8 491 aaKnown RBP23.08■■□□□ 1.29
DDR1-228ENST00000376575 AMNQ9BXJ7 453 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 MAF1Q9H063 256 aa23.08■■□□□ 1.29
DDR1-228ENST00000376575 DHX16O60231 1041 aaKnown RBP23.07■■□□□ 1.28
DDR1-228ENST00000376575 RGS2P41220 211 aa23.07■■□□□ 1.28
DDR1-228ENST00000376575 RGS22Q8NE09 1264 aa23.07■■□□□ 1.28
DDR1-228ENST00000376575 ABCB11O95342 1321 aa23.07■■□□□ 1.28
DDR1-228ENST00000376575 PFKFB2O60825 505 aa23.06■■□□□ 1.28
DDR1-228ENST00000376575 KCTD2Q14681 263 aa23.06■■□□□ 1.28
DDR1-228ENST00000376575 RRP36Q96EU6 259 aaKnown RBP23.06■■□□□ 1.28
DDR1-228ENST00000376575 APBA2Q99767 749 aa23.06■■□□□ 1.28
DDR1-228ENST00000376575 A1CFQ9NQ94 594 aaKnown RBP23.06■■□□□ 1.28
DDR1-228ENST00000376575 HOMER2Q9NSB8 354 aa23.06■■□□□ 1.28
DDR1-228ENST00000376575 DIS3Q9Y2L1 958 aaKnown RBP23.06■■□□□ 1.28
DDR1-228ENST00000376575 NFIBO00712 420 aa23.05■■□□□ 1.28
DDR1-228ENST00000376575 SLC4A3P48751 1232 aa23.05■■□□□ 1.28
DDR1-228ENST00000376575 GHRHRQ02643 423 aa23.05■■□□□ 1.28
DDR1-228ENST00000376575 ZNF792Q3KQV3 632 aa23.05■■□□□ 1.28
DDR1-228ENST00000376575 HOMER1Q86YM7 354 aa23.05■■□□□ 1.28
DDR1-228ENST00000376575 NPLOC4Q8TAT6 608 aa23.05■■□□□ 1.28
DDR1-228ENST00000376575 RAET1EQ8TD07 263 aa23.05■■□□□ 1.28
DDR1-228ENST00000376575 CWC22Q9HCG8 908 aaKnown RBP23.05■■□□□ 1.28
DDR1-228ENST00000376575 NAP1L2Q9ULW6 460 aaPredicted RBP23.05■■□□□ 1.28
DDR1-228ENST00000376575 PLXNA1Q9UIW2 1896 aa23.05■■□□□ 1.28
DDR1-228ENST00000376575 LCTP09848 1927 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 OPLAHO14841 1288 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 IFNAR1P17181 557 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 CYP2B6P20813 491 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 CCT2P78371 535 aaKnown RBP23.04■■□□□ 1.28
DDR1-228ENST00000376575 SCRN1Q12765 414 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 TRAF1Q13077 416 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 ME3Q16798 604 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 USH1GQ495M9 461 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 CCDC82Q8N4S0 544 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 SLAIN1Q8ND83 568 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 NCOA5Q9HCD5 579 aaKnown RBP23.04■■□□□ 1.28
DDR1-228ENST00000376575 CYP39A1Q9NYL5 469 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 PCDHA1Q9Y5I3 950 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 PFASO15067 1338 aa23.04■■□□□ 1.28
DDR1-228ENST00000376575 ADCY3O60266 1144 aa23.03■■□□□ 1.28
DDR1-228ENST00000376575 TRMT44Q8IYL2 757 aaKnown RBP23.03■■□□□ 1.28
DDR1-228ENST00000376575 ANKRD35Q8N283 1001 aa23.03■■□□□ 1.28
DDR1-228ENST00000376575 FAM133AQ8N9E0 248 aa23.03■■□□□ 1.28
DDR1-228ENST00000376575 ARMC5Q96C12 935 aa23.03■■□□□ 1.28
DDR1-228ENST00000376575 FGD4Q96M96 766 aa23.03■■□□□ 1.28
DDR1-228ENST00000376575 MRPL11Q9Y3B7 192 aaKnown RBP23.03■■□□□ 1.28
DDR1-228ENST00000376575 PRPF3O43395 683 aaKnown RBP23.02■■□□□ 1.28
DDR1-228ENST00000376575 LARGE1O95461 756 aa23.02■■□□□ 1.28
DDR1-228ENST00000376575 PGK2P07205 417 aa23.02■■□□□ 1.28
DDR1-228ENST00000376575 GRK4P32298 578 aa23.02■■□□□ 1.28
DDR1-228ENST00000376575 OLFML2BQ68BL8 750 aa23.02■■□□□ 1.28
DDR1-228ENST00000376575 DPP9Q86TI2 863 aa23.02■■□□□ 1.28
DDR1-228ENST00000376575 TRIB2Q92519 343 aa23.02■■□□□ 1.28
DDR1-228ENST00000376575 FLRT1Q9NZU1 646 aa23.02■■□□□ 1.28
DDR1-228ENST00000376575 SEC63Q9UGP8 760 aaKnown RBP23.02■■□□□ 1.28
DDR1-228ENST00000376575 V9GY48 417 aaPredicted RBP23.02■■□□□ 1.28
DDR1-228ENST00000376575 CCL14Q16627 93 aa23.01■■□□□ 1.27
DDR1-228ENST00000376575 ZNF467Q7Z7K2 595 aaPredicted RBP23.01■■□□□ 1.27
DDR1-228ENST00000376575 SAMD3Q8N6K7 520 aa23.01■■□□□ 1.27
DDR1-228ENST00000376575 DDX11Q96FC9 970 aa23.01■■□□□ 1.27
DDR1-228ENST00000376575 MAML3Q96JK9 1138 aa23.01■■□□□ 1.27
DDR1-228ENST00000376575 RNF26Q9BY78 433 aaPredicted RBP23.01■■□□□ 1.27
DDR1-228ENST00000376575 SLKQ9H2G2 1235 aaPredicted RBP23.01■■□□□ 1.27
DDR1-228ENST00000376575 SLC5A4Q9NY91 659 aa23.01■■□□□ 1.27
DDR1-228ENST00000376575 LIMCH1Q9UPQ0 1083 aa23.01■■□□□ 1.27
DDR1-228ENST00000376575 BRCA2P51587 3418 aa23.01■■□□□ 1.27
DDR1-228ENST00000376575 RBBP6Q7Z6E9 1792 aaKnown RBP23.01■■□□□ 1.27
DDR1-228ENST00000376575 hCG_1642624A0A1W2PR95 340 aa23■■□□□ 1.27
DDR1-228ENST00000376575 ELNP15502 786 aa23■■□□□ 1.27
DDR1-228ENST00000376575 STK3Q13188 491 aa23■■□□□ 1.27
DDR1-228ENST00000376575 PKN1Q16512 942 aa23■■□□□ 1.27
DDR1-228ENST00000376575 PIBF1Q8WXW3 757 aa23■■□□□ 1.27
DDR1-228ENST00000376575 TBC1D5Q92609 795 aa23■■□□□ 1.27
DDR1-228ENST00000376575 GTF3C6Q969F1 213 aa23■■□□□ 1.27
DDR1-228ENST00000376575 MAP3K20Q9NYL2 800 aaKnown RBP23■■□□□ 1.27
DDR1-228ENST00000376575 HSD17B4P51659 736 aa22.99■■□□□ 1.27
DDR1-228ENST00000376575 RPS6P62753 249 aaKnown RBP22.99■■□□□ 1.27
DDR1-228ENST00000376575 ST3GAL1Q11201 340 aa22.99■■□□□ 1.27
DDR1-228ENST00000376575 BAATQ14032 418 aaPredicted RBP22.99■■□□□ 1.27
DDR1-228ENST00000376575 PFKFB3Q16875 520 aaPredicted RBP22.99■■□□□ 1.27
DDR1-228ENST00000376575 SLC9C1Q4G0N8 1177 aa22.99■■□□□ 1.27
DDR1-228ENST00000376575 MAP3K21Q5TCX8 1036 aa22.99■■□□□ 1.27
DDR1-228ENST00000376575 MAMDC4Q6UXC1 1216 aa22.99■■□□□ 1.27
DDR1-228ENST00000376575 RNF207Q6ZRF8 634 aa22.99■■□□□ 1.27
DDR1-228ENST00000376575 MCF2L2Q86YR7 1114 aa22.99■■□□□ 1.27
DDR1-228ENST00000376575 MSL3Q8N5Y2 521 aaKnown RBP22.99■■□□□ 1.27
DDR1-228ENST00000376575 ZNF333Q96JL9 665 aa22.99■■□□□ 1.27
DDR1-228ENST00000376575 RBM27Q9P2N5 1060 aaKnown RBP22.99■■□□□ 1.27
DDR1-228ENST00000376575 ASTN1O14525 1302 aa22.99■■□□□ 1.27
DDR1-228ENST00000376575 SOWAHBA6NEL2 793 aa22.98■■□□□ 1.27
DDR1-228ENST00000376575 POTEB2H3BUK9 544 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms