RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 RTFDC1Q9BY42 306 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-202ENST00000376545 TRIM9Q9C026 710 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 TMEM51Q9NW97 253 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 A0A1W2PQJ5 194 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 H3BQF6 201 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 GRIK5Q16478 980 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 C16orf86Q6ZW13 317 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 HDXQ7Z353 690 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 KRT25Q7Z3Z0 450 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 PURBQ96QR8 312 aaKnown RBP11.97□□□□□ -0.49
ABCF1-202ENST00000376545 MKNK2Q9HBH9 465 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 ZCCHC17Q9NP64 241 aaKnown RBP11.97□□□□□ -0.49
ABCF1-202ENST00000376545 CTAGE15A4D2H0 777 aa11.96□□□□□ -0.49
ABCF1-202ENST00000376545 BAG3O95817 575 aa11.96□□□□□ -0.49
ABCF1-202ENST00000376545 CTAGE8P0CG41 777 aa11.96□□□□□ -0.49
ABCF1-202ENST00000376545 MIIPQ5JXC2 388 aa11.96□□□□□ -0.49
ABCF1-202ENST00000376545 CTAGE6Q86UF2 777 aa11.96□□□□□ -0.49
ABCF1-202ENST00000376545 CTAGE4Q8IX94 777 aa11.96□□□□□ -0.49
ABCF1-202ENST00000376545 MMTAG2Q9BU76 263 aaKnown RBP11.96□□□□□ -0.49
ABCF1-202ENST00000376545 ZSWIM4Q9H7M6 989 aa11.96□□□□□ -0.49
ABCF1-202ENST00000376545 TFRCP02786 760 aaKnown RBP11.96□□□□□ -0.5
ABCF1-202ENST00000376545 OR52Z1P0C646 297 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 PLCG1P19174 1290 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 KCNQ4P56696 695 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 ST5P78524 1137 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 TXNRD1Q16881 649 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 HEATR3Q7Z4Q2 680 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 CABP7Q86V35 215 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 CCDC170Q8IYT3 715 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 ZNF444Q8N0Y2 327 aaPredicted RBP11.96□□□□□ -0.5
ABCF1-202ENST00000376545 P2RX5Q93086 422 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 ERGIC2Q96RQ1 377 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 TUBGCP2Q9BSJ2 902 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 ABCB6Q9NP58 842 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 EXOC1Q9NV70 894 aa11.96□□□□□ -0.5
ABCF1-202ENST00000376545 ESYT2A0FGR8 921 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 BICDL2A1A5D9 508 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 POLR3GO15318 223 aaPredicted RBP11.95□□□□□ -0.5
ABCF1-202ENST00000376545 ERLIN1O75477 346 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 GRAPQ13588 217 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 NEDD1Q8NHV4 660 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 GRAPLQ8TC17 118 aaPredicted RBP11.95□□□□□ -0.5
ABCF1-202ENST00000376545 EXOC4Q96A65 974 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 TRIM10Q9UDY6 481 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 EIF3CLB5ME19 914 aaKnown RBP11.95□□□□□ -0.5
ABCF1-202ENST00000376545 KLRF2D3W0D1 207 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 HNRNPH3P31942 346 aaKnown RBP11.95□□□□□ -0.5
ABCF1-202ENST00000376545 VSNL1P62760 191 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 ANKRD40Q6AI12 368 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 TGFBRAP1Q8WUH2 860 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 TRIM47Q96LD4 638 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 EIF3CQ99613 913 aaKnown RBP11.95□□□□□ -0.5
ABCF1-202ENST00000376545 CALCOCO1Q9P1Z2 691 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 JAG2Q9Y219 1238 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 GPR75-ASB3A0A0A6YYF3 556 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 LDHCP07864 332 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 KRT83P78385 493 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 ZBED6P86452 979 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 STK4Q13043 487 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 CNNM4Q6P4Q7 775 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 AMIGO3Q86WK7 504 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 AMOTL1Q8IY63 956 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 TXLNBQ8N3L3 684 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 NOA1Q8NC60 698 aaKnown RBP11.95□□□□□ -0.5
ABCF1-202ENST00000376545 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 IQCDQ96DY2 449 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
ABCF1-202ENST00000376545 MTMR9Q96QG7 549 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 AGPAT5Q9NUQ2 364 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 LTBP1Q14766 1721 aa11.95□□□□□ -0.5
ABCF1-202ENST00000376545 THSD7AQ9UPZ6 1657 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 B4DLN1 442 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 ZPR1O75312 459 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.5
ABCF1-202ENST00000376545 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 MUM1L1Q5H9M0 696 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 CENPPQ6IPU0 288 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 PTF1AQ7RTS3 328 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 FAM114A1Q8IWE2 563 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 CSGALNACT2Q8N6G5 542 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 FAM163AQ96GL9 167 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-202ENST00000376545 GBP3Q9H0R5 595 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 ZNF287Q9HBT7 754 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-202ENST00000376545 PLIN4Q96Q06 1357 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 EDIL3O43854 480 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 GNA11P29992 359 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 HOXA7P31268 230 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-202ENST00000376545 CDK8P49336 464 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 SLC4A8Q2Y0W8 1093 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 FOXR2Q6PJQ5 311 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 NEK8Q86SG6 692 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
ABCF1-202ENST00000376545 RIOX1Q9H6W3 641 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 ADAM21Q9UKJ8 722 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 ABCB11O95342 1321 aa11.94□□□□□ -0.5
ABCF1-202ENST00000376545 SMCO2A6NFE2 343 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 hCG_1984214I3L0E3 225 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 IL1R1P14778 569 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 USP14P54578 494 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms