RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NUTM2EB1AL46 878 aaPredicted RBP16.3■□□□□ 0.2
MSH5-201ENST00000375703 CCNT1O60563 726 aaKnown RBP16.3■□□□□ 0.2
MSH5-201ENST00000375703 PDE4DQ08499 809 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 NUP58Q9BVL2 599 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 AGPAT5Q9NUQ2 364 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 ZNHIT6Q9NWK9 470 aaKnown RBP16.3■□□□□ 0.2
MSH5-201ENST00000375703 PSMD14O00487 310 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 ENC1O14682 589 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
MSH5-201ENST00000375703 CCNE1P24864 410 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 NAPAP54920 295 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 HERVK_113P62684 666 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 P2RX5Q93086 422 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 ZMYND12Q9H0C1 365 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 MAGEF1Q9HAY2 307 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
MSH5-201ENST00000375703 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 IRS2Q9Y4H2 1338 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 BICDL2A1A5D9 508 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 EIF3JO75822 258 aaKnown RBP16.29■□□□□ 0.2
MSH5-201ENST00000375703 OR52Z1P0C646 297 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 PPP4CP60510 307 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 ANKRD40Q6AI12 368 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 KRT25Q7Z3Z0 450 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 KIAA1328Q86T90 577 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 CPVLQ9H3G5 476 aa16.29■□□□□ 0.2
MSH5-201ENST00000375703 SMCO2A6NFE2 343 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 RASA1P20936 1047 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 CYLC1P35663 651 aaPredicted RBP16.28■□□□□ 0.2
MSH5-201ENST00000375703 STK4Q13043 487 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 NONOQ15233 471 aaKnown RBP eCLIP16.28■□□□□ 0.2
MSH5-201ENST00000375703 GRIK5Q16478 980 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 MEA1Q16626 185 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 MSL3Q8N5Y2 521 aaKnown RBP16.28■□□□□ 0.2
MSH5-201ENST00000375703 PCMTD1Q96MG8 357 aaPredicted RBP16.28■□□□□ 0.2
MSH5-201ENST00000375703 TRIM9Q9C026 710 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 ROBO3Q96MS0 1386 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 ZBTB22O15209 634 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 KRT86O43790 486 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 LDHCP07864 332 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 ASIC1P78348 528 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 FAM114A1Q8IWE2 563 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 RETREG2Q8NC44 543 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 EXOC4Q96A65 974 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 C7orf25Q9BPX7 421 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 ZNF287Q9HBT7 754 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 C6orf50Q9HD87 102 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 SAR1BQ9Y6B6 198 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 FLT1P17948 1338 aa16.28■□□□□ 0.2
MSH5-201ENST00000375703 TECP42680 631 aa16.27■□□□□ 0.2
MSH5-201ENST00000375703 MTIF2P46199 727 aaKnown RBP16.27■□□□□ 0.2
MSH5-201ENST00000375703 AMPD3Q01432 767 aa16.27■□□□□ 0.2
MSH5-201ENST00000375703 RC3H1Q5TC82 1133 aaKnown RBP16.27■□□□□ 0.2
MSH5-201ENST00000375703 ZBTB9Q96C00 473 aa16.27■□□□□ 0.2
MSH5-201ENST00000375703 SPZ1Q9BXG8 430 aa16.27■□□□□ 0.2
MSH5-201ENST00000375703 ROBO1Q9Y6N7 1651 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 RASSF10A6NK89 507 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 ATP1A1P05023 1023 aaKnown RBP16.27■□□□□ 0.19
MSH5-201ENST00000375703 GNA11P29992 359 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 KLK7P49862 253 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 ZBED6P86452 979 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 CASP8Q14790 479 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 ZNF662Q6ZS27 426 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 JAKMIP2Q96AA8 810 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 CNOT6LQ96LI5 555 aaKnown RBP16.27■□□□□ 0.19
MSH5-201ENST00000375703 NOC4LQ9BVI4 516 aaKnown RBP16.27■□□□□ 0.19
MSH5-201ENST00000375703 TTYH3Q9C0H2 523 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.19
MSH5-201ENST00000375703 LEMD3Q9Y2U8 911 aa16.27■□□□□ 0.19
MSH5-201ENST00000375703 COL5A3P25940 1745 aaPredicted RBP16.27■□□□□ 0.19
MSH5-201ENST00000375703 KDM4FA0A1W2PPD8 638 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 GNPATO15228 680 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 IPO7O95373 1038 aaKnown RBP16.26■□□□□ 0.19
MSH5-201ENST00000375703 FCER1AP12319 257 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 WDR93Q6P2C0 686 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 VAT1LQ9HCJ6 419 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 PSD3Q9NYI0 1048 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 VPS18Q9P253 973 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 CCDC88AQ3V6T2 1871 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 PPP1R2P41236 205 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 PAPD7Q5XG87 772 aaKnown RBP16.26■□□□□ 0.19
MSH5-201ENST00000375703 NEK8Q86SG6 692 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 CCDC170Q8IYT3 715 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 EHBP1Q8NDI1 1231 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 RRP36Q96EU6 259 aaKnown RBP16.26■□□□□ 0.19
MSH5-201ENST00000375703 EYA3Q99504 573 aa16.26■□□□□ 0.19
MSH5-201ENST00000375703 SRGAP2O75044 1071 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 CDK8P49336 464 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 FAM98CQ17RN3 349 aaKnown RBP16.25■□□□□ 0.19
MSH5-201ENST00000375703 USP17L2Q6R6M4 530 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 MMS19Q96T76 1030 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 CASZ1Q86V15 1759 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms