RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SPC25Q9HBM1 224 aa16.75■□□□□ 0.27
NELFE-201ENST00000375425 PQBP1O60828 265 aaKnown RBP16.74■□□□□ 0.27
NELFE-201ENST00000375425 CLTBP09497 229 aa16.74■□□□□ 0.27
NELFE-201ENST00000375425 GJA9P57773 515 aa16.74■□□□□ 0.27
NELFE-201ENST00000375425 NSMFQ6X4W1 530 aa16.74■□□□□ 0.27
NELFE-201ENST00000375425 DEFB123Q8N688 67 aa16.74■□□□□ 0.27
NELFE-201ENST00000375425 ZKSCAN3Q9BRR0 538 aa16.74■□□□□ 0.27
NELFE-201ENST00000375425 DDX49Q9Y6V7 483 aaKnown RBP16.74■□□□□ 0.27
NELFE-201ENST00000375425 ASTN1O14525 1302 aa16.74■□□□□ 0.27
NELFE-201ENST00000375425 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.73■□□□□ 0.27
NELFE-201ENST00000375425 ASGR1P07306 291 aa16.73■□□□□ 0.27
NELFE-201ENST00000375425 ITGB8P26012 769 aa16.73■□□□□ 0.27
NELFE-201ENST00000375425 CST5P28325 142 aaPredicted RBP16.73■□□□□ 0.27
NELFE-201ENST00000375425 GNASQ5JWF2 1037 aa16.73■□□□□ 0.27
NELFE-201ENST00000375425 Q7L0L9 218 aa16.73■□□□□ 0.27
NELFE-201ENST00000375425 PCSK9Q8NBP7 692 aaKnown RBP16.73■□□□□ 0.27
NELFE-201ENST00000375425 GLT1D1Q96MS3 346 aa16.73■□□□□ 0.27
NELFE-201ENST00000375425 PURBQ96QR8 312 aaKnown RBP16.73■□□□□ 0.27
NELFE-201ENST00000375425 NEDD4P46934 1319 aa16.73■□□□□ 0.27
NELFE-201ENST00000375425 TNFAIP2Q03169 654 aa16.72■□□□□ 0.27
NELFE-201ENST00000375425 ZNF543Q08ER8 600 aa16.72■□□□□ 0.27
NELFE-201ENST00000375425 BAATQ14032 418 aaPredicted RBP16.72■□□□□ 0.27
NELFE-201ENST00000375425 SHHQ15465 462 aa16.72■□□□□ 0.27
NELFE-201ENST00000375425 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
NELFE-201ENST00000375425 EEPD1Q7L9B9 569 aa16.72■□□□□ 0.27
NELFE-201ENST00000375425 ANKRD33Q7Z3H0 272 aa16.72■□□□□ 0.27
NELFE-201ENST00000375425 DGKHQ86XP1 1220 aa16.72■□□□□ 0.27
NELFE-201ENST00000375425 VTI1AQ96AJ9 217 aa16.72■□□□□ 0.27
NELFE-201ENST00000375425 TOX2Q96NM4 488 aa16.72■□□□□ 0.27
NELFE-201ENST00000375425 DSCC1Q9BVC3 393 aa16.72■□□□□ 0.27
NELFE-201ENST00000375425 UPF3AQ9H1J1 476 aaKnown RBP16.72■□□□□ 0.27
NELFE-201ENST00000375425 DCDC2CA8MYV0 355 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 NFIBO00712 420 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 KDM4AO75164 1064 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 SNHG28P0DPA3 235 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 PDE4AP27815 886 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 FAAP100Q0VG06 881 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 IQCA1Q86XH1 822 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 TMEM39AQ9NV64 488 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 CTNNA3Q9UI47 895 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 GNEQ9Y223 722 aaKnown RBP16.71■□□□□ 0.27
NELFE-201ENST00000375425 ELP1O95163 1332 aa16.71■□□□□ 0.27
NELFE-201ENST00000375425 KIAA0355O15063 1070 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 CTAGE5O15320 804 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 GOLGA8HP0CJ92 632 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 NT5C2P49902 561 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 NKX3-2P78367 333 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
NELFE-201ENST00000375425 BEX3Q00994 111 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 IMMTQ16891 758 aaKnown RBP16.7■□□□□ 0.26
NELFE-201ENST00000375425 C9orf50Q5SZB4 431 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 TAPT1Q6NXT6 567 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 PDGFCQ9NRA1 345 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 B4E1Z4 1266 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 DYNC1LI2O43237 492 aaPredicted RBP16.7■□□□□ 0.26
NELFE-201ENST00000375425 GSPT1P15170 499 aaKnown RBP16.7■□□□□ 0.26
NELFE-201ENST00000375425 RAG1P15918 1043 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 SMPD1P17405 629 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 CDK7P50613 346 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 CCDC178Q5BJE1 867 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 GPATCH4Q5T3I0 446 aaKnown RBP16.7■□□□□ 0.26
NELFE-201ENST00000375425 IQSEC1Q6DN90 963 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 FBXO16Q8IX29 292 aaPredicted RBP16.7■□□□□ 0.26
NELFE-201ENST00000375425 MORC4Q8TE76 937 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 CLEC4DQ8WXI8 215 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 UBA5Q9GZZ9 404 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 IL25Q9H293 177 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 MTMR10Q9NXD2 777 aa16.7■□□□□ 0.26
NELFE-201ENST00000375425 ADD3Q9UEY8 706 aaKnown RBP16.7■□□□□ 0.26
NELFE-201ENST00000375425 PTPDC1A2A3K4 754 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 PTGS1P23219 599 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 TMEM63BQ5T3F8 832 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 KIAA1211Q6ZU35 1233 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 TLK2Q86UE8 772 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 PNMA1Q8ND90 353 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 ANKS1AQ92625 1134 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 ZSCAN10Q96SZ4 725 aaPredicted RBP16.69■□□□□ 0.26
NELFE-201ENST00000375425 AP5M1Q9H0R1 490 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 CPVLQ9H3G5 476 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 KAT14Q9H8E8 782 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 PNMA2Q9UL42 364 aa16.69■□□□□ 0.26
NELFE-201ENST00000375425 MCM3APO60318 1980 aa16.68■□□□□ 0.26
NELFE-201ENST00000375425 CDH23Q9H251 3354 aa16.68■□□□□ 0.26
NELFE-201ENST00000375425 A0A0U1RQG5 324 aaPredicted RBP16.68■□□□□ 0.26
NELFE-201ENST00000375425 ARVCFO00192 962 aa16.68■□□□□ 0.26
NELFE-201ENST00000375425 CALML3P27482 149 aa16.68■□□□□ 0.26
NELFE-201ENST00000375425 ALDH5A1P51649 535 aaPredicted RBP16.68■□□□□ 0.26
NELFE-201ENST00000375425 TTC22Q5TAA0 569 aa16.68■□□□□ 0.26
NELFE-201ENST00000375425 RNF207Q6ZRF8 634 aa16.68■□□□□ 0.26
NELFE-201ENST00000375425 ENAHQ8N8S7 591 aaPredicted RBP16.68■□□□□ 0.26
NELFE-201ENST00000375425 KRT23Q9C075 422 aa16.68■□□□□ 0.26
NELFE-201ENST00000375425 VTA1Q9NP79 307 aa16.68■□□□□ 0.26
NELFE-201ENST00000375425 MROH7Q68CQ1 1323 aa16.68■□□□□ 0.26
NELFE-201ENST00000375425 EPHB4P54760 987 aa16.67■□□□□ 0.26
NELFE-201ENST00000375425 FSCN1Q16658 493 aaKnown RBP16.67■□□□□ 0.26
NELFE-201ENST00000375425 CXCL17Q6UXB2 119 aa16.67■□□□□ 0.26
NELFE-201ENST00000375425 SLC30A10Q6XR72 485 aa16.67■□□□□ 0.26
NELFE-201ENST00000375425 CNNM2Q9H8M5 875 aa16.67■□□□□ 0.26
NELFE-201ENST00000375425 Q9Y3F1 56 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms