RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 PTGS1P23219 599 aa16.36■□□□□ 0.21
CXCL12-202ENST00000374426 SNAP25P60880 206 aa16.36■□□□□ 0.21
CXCL12-202ENST00000374426 TKFCQ3LXA3 575 aa16.36■□□□□ 0.21
CXCL12-202ENST00000374426 CXCL17Q6UXB2 119 aa16.36■□□□□ 0.21
CXCL12-202ENST00000374426 CCDC129Q6ZRS4 1044 aa16.36■□□□□ 0.21
CXCL12-202ENST00000374426 KCTD1Q719H9 257 aa16.36■□□□□ 0.21
CXCL12-202ENST00000374426 TMEM199Q8N511 208 aa16.36■□□□□ 0.21
CXCL12-202ENST00000374426 STX8Q9UNK0 236 aa16.36■□□□□ 0.21
CXCL12-202ENST00000374426 ASB14A6NK59 587 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 GRXCR1A8MXD5 290 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 TLR3O15455 904 aaKnown RBP16.35■□□□□ 0.21
CXCL12-202ENST00000374426 ACRP10323 421 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 ALAS1P13196 640 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 PBX2P40425 430 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 MUM1L1Q5H9M0 696 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 PPP4R3BQ5MIZ7 849 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 RCSD1Q6JBY9 416 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 CCDC174Q6PII3 467 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 ZNF365Q70YC5 407 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 NOL8Q76FK4 1167 aaKnown RBP16.35■□□□□ 0.21
CXCL12-202ENST00000374426 TLK2Q86UE8 772 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 USP38Q8NB14 1042 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 SLC43A3Q8NBI5 491 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 PBX4Q9BYU1 374 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 CYP39A1Q9NYL5 469 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 PRR12Q9ULL5 1215 aa16.35■□□□□ 0.21
CXCL12-202ENST00000374426 TSPY2A6NKD2 308 aa16.34■□□□□ 0.21
CXCL12-202ENST00000374426 SMPD1P17405 629 aa16.34■□□□□ 0.21
CXCL12-202ENST00000374426 MX1P20591 662 aa16.34■□□□□ 0.21
CXCL12-202ENST00000374426 CYP2C18P33260 490 aa16.34■□□□□ 0.21
CXCL12-202ENST00000374426 FSCN1Q16658 493 aaKnown RBP16.34■□□□□ 0.21
CXCL12-202ENST00000374426 PDGFCQ9NRA1 345 aa16.34■□□□□ 0.21
CXCL12-202ENST00000374426 GRIN2DO15399 1336 aa16.34■□□□□ 0.21
CXCL12-202ENST00000374426 SALL3Q9BXA9 1300 aa16.34■□□□□ 0.21
CXCL12-202ENST00000374426 LRRC37A2A6NM11 1700 aa16.33■□□□□ 0.21
CXCL12-202ENST00000374426 CABYRO75952 493 aa16.33■□□□□ 0.2
CXCL12-202ENST00000374426 NOVP48745 357 aa16.33■□□□□ 0.2
CXCL12-202ENST00000374426 TMEM63BQ5T3F8 832 aa16.33■□□□□ 0.2
CXCL12-202ENST00000374426 VPS53Q5VIR6 699 aa16.33■□□□□ 0.2
CXCL12-202ENST00000374426 TAPT1Q6NXT6 567 aa16.33■□□□□ 0.2
CXCL12-202ENST00000374426 PSRC1Q6PGN9 363 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-202ENST00000374426 EEPD1Q7L9B9 569 aa16.33■□□□□ 0.2
CXCL12-202ENST00000374426 FBXO16Q8IX29 292 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-202ENST00000374426 PURBQ96QR8 312 aaKnown RBP16.33■□□□□ 0.2
CXCL12-202ENST00000374426 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
CXCL12-202ENST00000374426 NCOR1O75376 2440 aa16.33■□□□□ 0.2
CXCL12-202ENST00000374426 DYNC1LI2O43237 492 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-202ENST00000374426 ITGA7Q13683 1181 aa16.32■□□□□ 0.2
CXCL12-202ENST00000374426 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
CXCL12-202ENST00000374426 AP5M1Q9H0R1 490 aa16.32■□□□□ 0.2
CXCL12-202ENST00000374426 HIPK3Q9H422 1215 aa16.32■□□□□ 0.2
CXCL12-202ENST00000374426 IL23AQ9NPF7 189 aa16.32■□□□□ 0.2
CXCL12-202ENST00000374426 CXXC1Q9P0U4 656 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-202ENST00000374426 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
CXCL12-202ENST00000374426 MTMR7Q9Y216 660 aa16.32■□□□□ 0.2
CXCL12-202ENST00000374426 BDP1A6H8Y1 2624 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 ORC4O43929 436 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
CXCL12-202ENST00000374426 ICAM1P05362 532 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 FGRP09769 529 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 IQSEC1Q6DN90 963 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 NSMFQ6X4W1 530 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 MORC4Q8TE76 937 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 HERVK_113Q902F9 699 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 Q9Y3F1 56 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 LCTP09848 1927 aa16.31■□□□□ 0.2
CXCL12-202ENST00000374426 B4GALT4O60513 344 aa16.3■□□□□ 0.2
CXCL12-202ENST00000374426 SLC16A2P36021 539 aa16.3■□□□□ 0.2
CXCL12-202ENST00000374426 PSMC6P62333 389 aa16.3■□□□□ 0.2
CXCL12-202ENST00000374426 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
CXCL12-202ENST00000374426 TTBK2Q6IQ55 1244 aa16.3■□□□□ 0.2
CXCL12-202ENST00000374426 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
CXCL12-202ENST00000374426 NOC4LQ9BVI4 516 aaKnown RBP16.3■□□□□ 0.2
CXCL12-202ENST00000374426 RANBP17Q9H2T7 1088 aaKnown RBP16.3■□□□□ 0.2
CXCL12-202ENST00000374426 PRDM12Q9H4Q4 367 aa16.3■□□□□ 0.2
CXCL12-202ENST00000374426 VTA1Q9NP79 307 aa16.3■□□□□ 0.2
CXCL12-202ENST00000374426 ZEB2O60315 1214 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 FGBP02675 491 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 CCL23P55773 120 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 BAATQ14032 418 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-202ENST00000374426 ALX1Q15699 326 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 BTNL9Q6UXG8 535 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 KIAA1211Q6ZU35 1233 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 SYMPKQ92797 1274 aaKnown RBP16.29■□□□□ 0.2
CXCL12-202ENST00000374426 GAS2L1Q99501 681 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-202ENST00000374426 SEZ6LQ9BYH1 1024 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 WNT8AQ9H1J5 351 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 PRDM6Q9NQX0 595 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 XIRP2A4UGR9 3374 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 TRANK1O15050 2925 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 REV3LO60673 3130 aa16.29■□□□□ 0.2
CXCL12-202ENST00000374426 NFIBO00712 420 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 RAB30Q15771 203 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 DUSP28Q4G0W2 176 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 SYDE2Q5VT97 1194 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 OTOP2Q7RTS6 562 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms