RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 KLRC4O43908 158 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 GDF11O95390 407 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 CASP14P31944 242 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 ATRIPQ8WXE1 791 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 CCSER1Q9C0I3 900 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 PLIN4Q96Q06 1357 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 POTEMA6NI47 508 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 H0YIN7 160 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 SNHG28P0DPA3 235 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 SH3BP5LQ7L8J4 393 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 MMTAG2Q9BU76 263 aaKnown RBP17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 RMND1Q9NWS8 449 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 KCNJ18B7U540 433 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 AKR1B15C9JRZ8 316 aaPredicted RBP17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 TAL1P17542 331 aaPredicted RBP17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 KCNJ12Q14500 433 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 PODNQ7Z5L7 613 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 PPFIBP1Q86W92 1011 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 KBTBD4Q9NVX7 518 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 FAM198AQ9UFP1 575 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 SWAP70Q9UH65 585 aa17.99■□□□□ 0.47
CNKSR1-202ENST00000374253 NRXN2Q9P2S2 1712 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 RNF225M0QZC1 329 aaPredicted RBP17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 FCER1AP12319 257 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 PRPHP41219 470 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 KCNJ6P48051 423 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 FXR1P51114 621 aaKnown RBP eCLIP17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 CALCRLQ16602 461 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 FILIP1LQ4L180 1135 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 DACT2Q5SW24 774 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 TRIM65Q6PJ69 517 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 PDCL2Q8N4E4 241 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 SLX4Q8IY92 1834 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 LAD1O00515 517 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 EEF2P13639 858 aaKnown RBP17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 ASIC1P78348 528 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 TCP11X2Q5H9J9 407 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 ADSSL1Q8N142 457 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 ANKRD7Q92527 254 aa17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 NUP88Q99567 741 aaPredicted RBP17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 TDRD3Q9H7E2 651 aaKnown RBP17.98■□□□□ 0.47
CNKSR1-202ENST00000374253 GYPCP04921 128 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 PBX1P40424 430 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 COPB1P53618 953 aaKnown RBP17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 ETF1P62495 437 aaKnown RBP17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 PPP4R3BQ5MIZ7 849 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 ZDHHC15Q96MV8 337 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 NUDT12Q9BQG2 462 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L15C9J2P7 530 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L13C9JLJ4 530 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L11C9JVI0 530 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L18D6R9N7 530 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L22D6RA61 530 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L17D6RBQ6 530 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L19D6RCP7 530 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L20D6RJB6 530 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 STX10O60499 249 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L24Q0WX57 530 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 STK4Q13043 487 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 SEPT2Q15019 361 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 CT47A1Q5JQC4 288 aaPredicted RBP17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 USP17L6PQ6QN14 398 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 IRF2BP1Q8IU81 584 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 CTAGE1Q96RT6 745 aa17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 IRX2Q9BZI1 471 aaPredicted RBP17.97■□□□□ 0.47
CNKSR1-202ENST00000374253 PDE4DQ08499 809 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 CERKLQ49MI3 558 aaPredicted RBP17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 RAD9BQ6WBX8 426 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 TRIM47Q96LD4 638 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 SRRTQ9BXP5 876 aaKnown RBP17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 TRIM9Q9C026 710 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 LRWD1Q9UFC0 647 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 MYH4Q9Y623 1939 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 ELF2Q15723 593 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 DYMQ7RTS9 669 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 WDR24Q96S15 920 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 MAP7D2Q96T17 732 aa17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 MRPL44Q9H9J2 332 aaKnown RBP17.96■□□□□ 0.47
CNKSR1-202ENST00000374253 ESYT2A0FGR8 921 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 KIF2AO00139 706 aaPredicted RBP17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 UBXN1Q04323 297 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 MCM6Q14566 821 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 STRIP1Q5VSL9 837 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 MTMR9Q96QG7 549 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 TRIM34Q9BYJ4 488 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 LZTFL1Q9NQ48 299 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 LIMA1Q9UHB6 759 aaKnown RBP17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 NKRFO15226 690 aaKnown RBP eCLIP17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 ZSCAN12O43309 604 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 MFAP3LO75121 409 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 SLC1A4P43007 532 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 JAG1P78504 1218 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 FLAD1Q8NFF5 587 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 AK8Q96MA6 479 aa17.95■□□□□ 0.46
CNKSR1-202ENST00000374253 SPDYE4A6NLX3 237 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 ZBTB5O15062 677 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms