RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TNNI2P48788 182 aa28.29■■■□□ 2.12
CTSA-203ENST00000372459 PDXDC2PQ6P474 469 aa28.29■■■□□ 2.12
CTSA-203ENST00000372459 ZNF830Q96NB3 372 aaPredicted RBP28.29■■■□□ 2.12
CTSA-203ENST00000372459 ZBTB21Q9ULJ3 1066 aa28.29■■■□□ 2.12
CTSA-203ENST00000372459 ZNF280AP59817 542 aaPredicted RBP28.28■■■□□ 2.12
CTSA-203ENST00000372459 DPYDQ12882 1025 aa28.28■■■□□ 2.12
CTSA-203ENST00000372459 IKQ13123 557 aaPredicted RBP28.28■■■□□ 2.12
CTSA-203ENST00000372459 GSDMAQ96QA5 445 aa28.28■■■□□ 2.12
CTSA-203ENST00000372459 NUP88Q99567 741 aaPredicted RBP28.28■■■□□ 2.12
CTSA-203ENST00000372459 CCSER1Q9C0I3 900 aa28.28■■■□□ 2.12
CTSA-203ENST00000372459 TTC12Q9H892 705 aaPredicted RBP28.28■■■□□ 2.12
CTSA-203ENST00000372459 DISC1Q9NRI5 854 aa28.28■■■□□ 2.12
CTSA-203ENST00000372459 PCDHA1Q9Y5I3 950 aa28.28■■■□□ 2.12
CTSA-203ENST00000372459 UBA7P41226 1012 aa28.28■■■□□ 2.12
CTSA-203ENST00000372459 UBE2SQ16763 222 aa28.28■■■□□ 2.12
CTSA-203ENST00000372459 TMEM232C9JQI7 657 aa28.27■■■□□ 2.12
CTSA-203ENST00000372459 CDC25AP30304 524 aa28.27■■■□□ 2.12
CTSA-203ENST00000372459 STAT6P42226 847 aa28.27■■■□□ 2.12
CTSA-203ENST00000372459 SYDE2Q5VT97 1194 aa28.27■■■□□ 2.12
CTSA-203ENST00000372459 TMX2Q9Y320 296 aa28.27■■■□□ 2.12
CTSA-203ENST00000372459 KARSQ15046 597 aaKnown RBP28.26■■■□□ 2.11
CTSA-203ENST00000372459 BTNL9Q6UXG8 535 aa28.26■■■□□ 2.11
CTSA-203ENST00000372459 RASSF8Q8NHQ8 419 aa28.26■■■□□ 2.11
CTSA-203ENST00000372459 GOPCQ9HD26 462 aa28.26■■■□□ 2.11
CTSA-203ENST00000372459 PGAP2Q9UHJ9 254 aa28.26■■■□□ 2.11
CTSA-203ENST00000372459 SHTN1A0MZ66 631 aa28.26■■■□□ 2.11
CTSA-203ENST00000372459 MIGA2Q7L4E1 593 aa28.26■■■□□ 2.11
CTSA-203ENST00000372459 CDAN1Q8IWY9 1227 aa28.26■■■□□ 2.11
CTSA-203ENST00000372459 AMNQ9BXJ7 453 aa28.26■■■□□ 2.11
CTSA-203ENST00000372459 CT47A1Q5JQC4 288 aaPredicted RBP28.25■■■□□ 2.11
CTSA-203ENST00000372459 RRAGBQ5VZM2 374 aa28.25■■■□□ 2.11
CTSA-203ENST00000372459 POTEDQ86YR6 584 aa28.25■■■□□ 2.11
CTSA-203ENST00000372459 GTPBP6O43824 516 aaPredicted RBP28.24■■■□□ 2.11
CTSA-203ENST00000372459 ECE1P42892 770 aa28.24■■■□□ 2.11
CTSA-203ENST00000372459 PTGER2P43116 358 aa28.24■■■□□ 2.11
CTSA-203ENST00000372459 MAP3K10Q02779 954 aa28.24■■■□□ 2.11
CTSA-203ENST00000372459 PP2D1A8MPX8 630 aa28.24■■■□□ 2.11
CTSA-203ENST00000372459 RRP9O43818 475 aaKnown RBP28.24■■■□□ 2.11
CTSA-203ENST00000372459 LMOD1P29536 600 aaPredicted RBP28.24■■■□□ 2.11
CTSA-203ENST00000372459 CAP2P40123 477 aa28.24■■■□□ 2.11
CTSA-203ENST00000372459 RASSF7Q02833 373 aa28.24■■■□□ 2.11
CTSA-203ENST00000372459 TNFAIP1Q13829 316 aa28.24■■■□□ 2.11
CTSA-203ENST00000372459 CALCRLQ16602 461 aa28.24■■■□□ 2.11
CTSA-203ENST00000372459 CCDC186Q7Z3E2 898 aa28.24■■■□□ 2.11
CTSA-203ENST00000372459 PTGS1P23219 599 aa28.23■■■□□ 2.11
CTSA-203ENST00000372459 CASP1P29466 404 aa28.23■■■□□ 2.11
CTSA-203ENST00000372459 PPP4R3AQ6IN85 833 aa28.23■■■□□ 2.11
CTSA-203ENST00000372459 FBXO11Q86XK2 927 aa28.23■■■□□ 2.11
CTSA-203ENST00000372459 SPICE1Q8N0Z3 855 aa28.23■■■□□ 2.11
CTSA-203ENST00000372459 ACER1Q8TDN7 264 aa28.23■■■□□ 2.11
CTSA-203ENST00000372459 MTMR9Q96QG7 549 aa28.23■■■□□ 2.11
CTSA-203ENST00000372459 HSD3B7Q9H2F3 369 aa28.23■■■□□ 2.11
CTSA-203ENST00000372459 STAMQ92783 540 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 DPF2Q92785 391 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 NAP1L4Q99733 375 aaKnown RBP28.22■■■□□ 2.11
CTSA-203ENST00000372459 SH2D4AQ9H788 454 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 FZD9O00144 591 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 EDIL3O43854 480 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 TDP2O95551 362 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 TECP42680 631 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 RASA3Q14644 834 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 CABP7Q86V35 215 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 ENOX1Q8TC92 643 aaKnown RBP28.22■■■□□ 2.11
CTSA-203ENST00000372459 MTRQ99707 1265 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 NRBP1Q9UHY1 535 aa28.22■■■□□ 2.11
CTSA-203ENST00000372459 PSDA5PKW4 1024 aaPredicted RBP28.21■■■□□ 2.11
CTSA-203ENST00000372459 ERCC5P28715 1186 aaPredicted RBP28.21■■■□□ 2.11
CTSA-203ENST00000372459 GMPSP49915 693 aaPredicted RBP28.21■■■□□ 2.11
CTSA-203ENST00000372459 STAT2P52630 851 aa28.21■■■□□ 2.11
CTSA-203ENST00000372459 KCNF1Q9H3M0 494 aa28.21■■■□□ 2.11
CTSA-203ENST00000372459 SLC37A4O43826 429 aa28.2■■■□□ 2.11
CTSA-203ENST00000372459 GCFC2P16383 781 aaKnown RBP28.2■■■□□ 2.11
CTSA-203ENST00000372459 TMEM266Q2M3C6 531 aa28.2■■■□□ 2.11
CTSA-203ENST00000372459 MCTP2Q6DN12 878 aa28.2■■■□□ 2.11
CTSA-203ENST00000372459 MICALL2Q8IY33 904 aa28.2■■■□□ 2.11
CTSA-203ENST00000372459 IGSF22Q8N9C0 903 aa28.2■■■□□ 2.11
CTSA-203ENST00000372459 BLZF1Q9H2G9 400 aa28.2■■■□□ 2.11
CTSA-203ENST00000372459 CUEDC2Q9H467 287 aa28.2■■■□□ 2.11
CTSA-203ENST00000372459 IFNKQ9P0W0 207 aa28.2■■■□□ 2.11
CTSA-203ENST00000372459 TXKP42681 527 aa28.2■■■□□ 2.1
CTSA-203ENST00000372459 FXR2P51116 673 aaKnown RBP eCLIP28.2■■■□□ 2.1
CTSA-203ENST00000372459 FANCCQ00597 558 aa28.2■■■□□ 2.1
CTSA-203ENST00000372459 NAALADL2Q58DX5 795 aa28.2■■■□□ 2.1
CTSA-203ENST00000372459 XPO4Q9C0E2 1151 aaKnown RBP28.2■■■□□ 2.1
CTSA-203ENST00000372459 PRR12Q9ULL5 1215 aa28.2■■■□□ 2.1
CTSA-203ENST00000372459 USP17L15C9J2P7 530 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 USP17L13C9JLJ4 530 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 USP17L11C9JVI0 530 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 USP17L18D6R9N7 530 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 USP17L22D6RA61 530 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 USP17L17D6RBQ6 530 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 USP17L19D6RCP7 530 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 USP17L20D6RJB6 530 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 MYL1P05976 194 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 ASNSP08243 561 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 SNAP25P60880 206 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 USP17L24Q0WX57 530 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 AP3B2Q13367 1082 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 CUL4BQ13620 913 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 USP17L6PQ6QN14 398 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms