RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 TRIM50Q86XT4 487 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 TRIML1Q8N9V2 468 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 PITPNM3Q9BZ71 974 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 STAM2O75886 525 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 IL15P40933 162 aaPredicted RBP16.58■□□□□ 0.25
COL5A1-201ENST00000371817 RARS2Q5T160 578 aaKnown RBP16.58■□□□□ 0.25
COL5A1-201ENST00000371817 GPIHBP1Q8IV16 184 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 TRPV6Q9H1D0 765 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 TTC21BQ7Z4L5 1316 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 H0Y626 953 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 TRIM16O95361 564 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 C2orf54Q08AI8 447 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 MAGEB6Q8N7X4 407 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 ATP5J2-PTCD1G3V325 749 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 MDM2Q00987 491 aaPredicted RBP16.58■□□□□ 0.24
COL5A1-201ENST00000371817 BFSP1Q12934 665 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 THAP11Q96EK4 314 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL5A1-201ENST00000371817 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 EXOC3O60645 756 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 GCFC2P16383 781 aaKnown RBP16.58■□□□□ 0.24
COL5A1-201ENST00000371817 GPTP24298 496 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 RIOK1Q9BRS2 568 aaKnown RBP16.58■□□□□ 0.24
COL5A1-201ENST00000371817 TBC1D7Q9P0N9 293 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 H7C1D1 291 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 SUPT3HO75486 399 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 SMYD3Q9H7B4 428 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 ENC1O14682 589 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 NVLO15381 856 aaKnown RBP16.58■□□□□ 0.24
COL5A1-201ENST00000371817 CFLARO15519 480 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 DHX9Q08211 1270 aaKnown RBP16.58■□□□□ 0.24
COL5A1-201ENST00000371817 BEND6Q5SZJ8 279 aaPredicted RBP16.58■□□□□ 0.24
COL5A1-201ENST00000371817 KAZNQ674X7 775 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 MPRIPQ6WCQ1 1025 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.58■□□□□ 0.24
COL5A1-201ENST00000371817 GIPC2Q8TF65 315 aa16.58■□□□□ 0.24
COL5A1-201ENST00000371817 SUCLA2Q9P2R7 463 aaPredicted RBP16.58■□□□□ 0.24
COL5A1-201ENST00000371817 OLFML2BQ68BL8 750 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 CNGA3Q16281 694 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 PTPROQ16827 1216 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 KCNV2Q8TDN2 545 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 TMOD4Q9NZQ9 345 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 DNM3Q9UQ16 869 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 SLC27A2O14975 620 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 ACTN1P12814 892 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 CYLC2Q14093 348 aaPredicted RBP16.57■□□□□ 0.24
COL5A1-201ENST00000371817 ELAC2Q9BQ52 826 aaKnown RBP16.57■□□□□ 0.24
COL5A1-201ENST00000371817 ZMYND12Q9H0C1 365 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 EXOC1LA0A1B0GW35 172 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 GLT8D2Q9H1C3 349 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 STMN3Q9NZ72 180 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 COQ7Q99807 217 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
COL5A1-201ENST00000371817 UTP6Q9NYH9 597 aaKnown RBP16.57■□□□□ 0.24
COL5A1-201ENST00000371817 ARHGEF35A5YM69 484 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 PGRMC1O00264 195 aaKnown RBP16.57■□□□□ 0.24
COL5A1-201ENST00000371817 TOM1L1O75674 476 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 RAD23BP54727 409 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 MYCT1Q8N699 235 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 TRAF3IP3Q9Y228 551 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 ANKRD65E5RJM6 399 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 YWHAEP62258 255 aaKnown RBP16.57■□□□□ 0.24
COL5A1-201ENST00000371817 RASSF7Q02833 373 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 HIPK4Q8NE63 616 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 CATSPER1Q8NEC5 780 aa16.57■□□□□ 0.24
COL5A1-201ENST00000371817 KAT6AQ92794 2004 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 NBNO60934 754 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 RGS9BPQ6ZS82 235 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 TLK2Q86UE8 772 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 ELF1P32519 619 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 RAPGEF5Q92565 580 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 SESN1Q9Y6P5 492 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 TEDDM1Q5T9Z0 273 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 CEP85Q6P2H3 762 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 EFCAB5A4FU69 1503 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 P4HA1P13674 534 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 SPARCL1Q14515 664 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 TTBK2Q6IQ55 1244 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 OTUD6AQ7L8S5 288 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 RAB14P61106 215 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 HDLBPQ00341 1268 aaKnown RBP16.56■□□□□ 0.24
COL5A1-201ENST00000371817 AP1B1Q10567 949 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 DRP2Q13474 957 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-201ENST00000371817 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 NOVA2Q9UNW9 492 aaKnown RBP16.56■□□□□ 0.24
COL5A1-201ENST00000371817 PLTPP55058 493 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 PHACTR3Q96KR7 559 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 OSBPL9Q96SU4 736 aa16.56■□□□□ 0.24
COL5A1-201ENST00000371817 SH3GL1Q99961 368 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 NAA35Q5VZE5 725 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 CPA1P15085 419 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 FAM173BQ6P4H8 233 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 PDZD4Q76G19 769 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms