RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 SNX17Q15036 470 aa16.89■□□□□ 0.29
EDF1-202ENST00000371648 TMEM67Q5HYA8 995 aa16.89■□□□□ 0.29
EDF1-202ENST00000371648 SYDE2Q5VT97 1194 aa16.89■□□□□ 0.29
EDF1-202ENST00000371648 PHF24Q9UPV7 400 aa16.89■□□□□ 0.29
EDF1-202ENST00000371648 DNAJC25-GNG10A0A024R161 153 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 SNAI1O95863 264 aaPredicted RBP16.88■□□□□ 0.29
EDF1-202ENST00000371648 PARP1P09874 1014 aaKnown RBP16.88■□□□□ 0.29
EDF1-202ENST00000371648 MCM5P33992 734 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 OAZ1P54368 228 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 TLE2Q04725 743 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 GPATCH4Q5T3I0 446 aaKnown RBP16.88■□□□□ 0.29
EDF1-202ENST00000371648 SH3RF1Q7Z6J0 888 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 ANKRD35Q8N283 1001 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 BADQ92934 168 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 HOMER2Q9NSB8 354 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 MTMR10Q9NXD2 777 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
EDF1-202ENST00000371648 COL6A3P12111 3177 aa16.88■□□□□ 0.29
EDF1-202ENST00000371648 SMCHD1A6NHR9 2005 aa16.87■□□□□ 0.29
EDF1-202ENST00000371648 TRIM43BA6NCK2 446 aa16.87■□□□□ 0.29
EDF1-202ENST00000371648 DHX16O60231 1041 aaKnown RBP16.87■□□□□ 0.29
EDF1-202ENST00000371648 SEC23AQ15436 765 aa16.87■□□□□ 0.29
EDF1-202ENST00000371648 BTNL9Q6UXG8 535 aa16.87■□□□□ 0.29
EDF1-202ENST00000371648 MSL3Q8N5Y2 521 aaKnown RBP16.87■□□□□ 0.29
EDF1-202ENST00000371648 TRIM43Q96BQ3 446 aaPredicted RBP16.87■□□□□ 0.29
EDF1-202ENST00000371648 AGBL1Q96MI9 1066 aa16.87■□□□□ 0.29
EDF1-202ENST00000371648 UBA5Q9GZZ9 404 aa16.87■□□□□ 0.29
EDF1-202ENST00000371648 PDLIM7Q9NR12 457 aa16.87■□□□□ 0.29
EDF1-202ENST00000371648 FAM184BQ9ULE4 1060 aa16.87■□□□□ 0.29
EDF1-202ENST00000371648 PRC1O43663 620 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 ADAMTS4O75173 837 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 SNHG28P0DPA3 235 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 ALAS1P13196 640 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 SHHQ15465 462 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 C1orf53Q5VUE5 145 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 MAMDC4Q6UXC1 1216 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 NFXL1Q6ZNB6 911 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 CATIPQ7Z7H3 387 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 MB21D2Q8IYB1 491 aaPredicted RBP16.86■□□□□ 0.29
EDF1-202ENST00000371648 CHST13Q8NET6 341 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 VAT1LQ9HCJ6 419 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 FBXO40Q9UH90 709 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 CCPG1Q9ULG6 757 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 SYNGAP1Q96PV0 1343 aa16.86■□□□□ 0.29
EDF1-202ENST00000371648 A0A1W2PQ45 241 aaPredicted RBP16.85■□□□□ 0.29
EDF1-202ENST00000371648 A0A1W2PQY0 241 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 PQBP1O60828 265 aaKnown RBP16.85■□□□□ 0.29
EDF1-202ENST00000371648 ACVR2BQ13705 512 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 KRT32Q14532 448 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 ASPRV1Q53RT3 343 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 C9orf50Q5SZB4 431 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 ZNF467Q7Z7K2 595 aaPredicted RBP16.85■□□□□ 0.29
EDF1-202ENST00000371648 TMTC2Q8N394 836 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 IGDCC4Q8TDY8 1250 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 TRERF1Q96PN7 1200 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 NEK1Q96PY6 1258 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.85■□□□□ 0.29
EDF1-202ENST00000371648 STXBP5LQ9Y2K9 1186 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 SYNRGQ9UMZ2 1314 aa16.85■□□□□ 0.29
EDF1-202ENST00000371648 PLXNA1Q9UIW2 1896 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 POTEB2H3BUK9 544 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 ACLYP53396 1101 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 ANTXR2P58335 489 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 TKFCQ3LXA3 575 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 TMEM87BQ96K49 555 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 FGD4Q96M96 766 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 FAM161BQ96MY7 647 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 RANBP17Q9H2T7 1088 aaKnown RBP16.84■□□□□ 0.29
EDF1-202ENST00000371648 CPVLQ9H3G5 476 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 SENP2Q9HC62 589 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 RNF146Q9NTX7 359 aa16.84■□□□□ 0.29
EDF1-202ENST00000371648 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 CCDC69A6NI79 296 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 ZNF536O15090 1300 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 DUSP11O75319 330 aaKnown RBP16.83■□□□□ 0.28
EDF1-202ENST00000371648 ICAM1P05362 532 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 CLTBP09497 229 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 ITGB8P26012 769 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 IRX5P78411 483 aaPredicted RBP16.83■□□□□ 0.28
EDF1-202ENST00000371648 KCNA10Q16322 511 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.83■□□□□ 0.28
EDF1-202ENST00000371648 ARMCX2Q7L311 632 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 RASEFQ8IZ41 740 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 KLHDC9Q8NEP7 349 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 TSEN34Q9BSV6 310 aaKnown RBP16.83■□□□□ 0.28
EDF1-202ENST00000371648 MTA3Q9BTC8 594 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 ABHD16BQ9H3Z7 469 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 ACAD9Q9H845 621 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 STARD7Q9NQZ5 370 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 PNMA2Q9UL42 364 aa16.83■□□□□ 0.28
EDF1-202ENST00000371648 LAMA2P24043 3122 aaKnown RBP16.83■□□□□ 0.28
EDF1-202ENST00000371648 KLRF2D3W0D1 207 aa16.82■□□□□ 0.28
EDF1-202ENST00000371648 C6orf222P0C671 652 aaPredicted RBP16.82■□□□□ 0.28
EDF1-202ENST00000371648 HSPA4P34932 840 aa16.82■□□□□ 0.28
EDF1-202ENST00000371648 FGD1P98174 961 aa16.82■□□□□ 0.28
EDF1-202ENST00000371648 CNTN2Q02246 1040 aa16.82■□□□□ 0.28
EDF1-202ENST00000371648 CCDC144BQ3MJ40 725 aa16.82■□□□□ 0.28
EDF1-202ENST00000371648 TSGA10IPQ3SY00 556 aa16.82■□□□□ 0.28
EDF1-202ENST00000371648 CCDC144CPQ8IYA2 1237 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms