RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 PPP1R37O75864 691 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 SRGNP10124 158 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 EEF1GP26641 437 aaKnown RBP10.75□□□□□ -0.69
LRRC40-201ENST00000370952 ZBED6P86452 979 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 TRADDQ15628 312 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 NPY5RQ15761 445 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 ZNF662Q6ZS27 426 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 MYCBPAPQ8TBZ2 947 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 N4BP2L2Q92802 583 aaPredicted RBP10.75□□□□□ -0.69
LRRC40-201ENST00000370952 ISCA1Q9BUE6 129 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 BACH1O14867 736 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 CHRNA2Q15822 529 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 SPRED3Q2MJR0 410 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 KDM7AQ6ZMT4 941 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 MICALCLQ6ZW33 695 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 CEP57Q86XR8 500 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 C2CD5Q86YS7 1000 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 CCDC170Q8IYT3 715 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 CSGALNACT2Q8N6G5 542 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 STAG1Q8WVM7 1258 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 SH2D4AQ9H788 454 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 VCPKMTQ9H867 229 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 EPB41L5Q9HCM4 733 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 SLC40A1Q9NP59 571 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 SALL4Q9UJQ4 1053 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 HYOU1Q9Y4L1 999 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 PCDHA13Q9Y5I0 950 aa10.75□□□□□ -0.69
LRRC40-201ENST00000370952 BUB1O43683 1085 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 USO1O60763 962 aaKnown RBP10.74□□□□□ -0.69
LRRC40-201ENST00000370952 ATP2C2O75185 946 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 BMP15O95972 392 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 PCCAP05165 728 aaPredicted RBP10.74□□□□□ -0.69
LRRC40-201ENST00000370952 PDHBP11177 359 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 VEGFAP15692 232 aaPredicted RBP10.74□□□□□ -0.69
LRRC40-201ENST00000370952 ERCC3P19447 782 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 ELF1P32519 619 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 MTIF2P46199 727 aaKnown RBP10.74□□□□□ -0.69
LRRC40-201ENST00000370952 RNASE9P60153 205 aaKnown RBP10.74□□□□□ -0.69
LRRC40-201ENST00000370952 GUCY2DQ02846 1103 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 NEDD9Q14511 834 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 CEP85LQ5SZL2 805 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 TNFRSF25Q93038 417 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 CAVIN3Q969G5 261 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 ARHGAP20Q9P2F6 1191 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 ATXN2Q99700 1313 aaKnown RBP10.74□□□□□ -0.69
LRRC40-201ENST00000370952 HEXIM1O94992 359 aaKnown RBP10.74□□□□□ -0.69
LRRC40-201ENST00000370952 PAFAH1B1P43034 410 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 IQCKQ8N0W5 287 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 SDR42E1Q8WUS8 393 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 A1CFQ9NQ94 594 aaKnown RBP10.74□□□□□ -0.69
LRRC40-201ENST00000370952 MCM8Q9UJA3 840 aa10.74□□□□□ -0.69
LRRC40-201ENST00000370952 SOS2Q07890 1332 aaPredicted RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 FRMD3A2A2Y4 597 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 PSMA7O14818 248 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 EPHB6O15197 1021 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 EIF4A3P38919 411 aaKnown RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 E2F5Q15329 346 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 TTI2Q6NXR4 508 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 TMC4Q7Z404 712 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 MAATS1Q7Z4T9 603 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 PIK3R5Q8WYR1 880 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 CNOT6LQ96LI5 555 aaKnown RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 CCDC114Q96M63 670 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 THAP9Q9H5L6 903 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 FAM207AQ9NSI2 230 aaPredicted RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 ODF2LQ9ULJ1 636 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 LMTK3Q96Q04 1460 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 CLGNO14967 610 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 KIF1CO43896 1103 aaKnown RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 AKR1B10O60218 316 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 RASSF9O75901 435 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 CSF1RP07333 972 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 TCP1P17987 556 aaKnown RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 NF2P35240 595 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 MDH1P40925 334 aaKnown RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 KIF11P52732 1056 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 SMTNP53814 917 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 FUT2Q10981 343 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 MAP3K12Q12852 859 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 SEC23AQ15436 765 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 PREPLQ4J6C6 727 aaPredicted RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 KRT28Q7Z3Y7 464 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 SPATS2Q86XZ4 545 aaKnown RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 KIRREL3Q8IZU9 778 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 TMTC2Q8N394 836 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 SPATA5Q8NB90 893 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 NOC4LQ9BVI4 516 aaKnown RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 TSGA10Q9BZW7 698 aa10.73□□□□□ -0.69
LRRC40-201ENST00000370952 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.73□□□□□ -0.69
LRRC40-201ENST00000370952 CYP2D7A0A087X1C5 515 aa10.72□□□□□ -0.69
LRRC40-201ENST00000370952 PRPF3O43395 683 aaKnown RBP10.72□□□□□ -0.69
LRRC40-201ENST00000370952 KLRC4O43908 158 aa10.72□□□□□ -0.69
LRRC40-201ENST00000370952 PDE8BO95263 885 aa10.72□□□□□ -0.69
LRRC40-201ENST00000370952 NLRP5P59047 1200 aa10.72□□□□□ -0.69
LRRC40-201ENST00000370952 RASGRF1Q13972 1273 aa10.72□□□□□ -0.69
LRRC40-201ENST00000370952 NAALADL2Q58DX5 795 aa10.72□□□□□ -0.69
LRRC40-201ENST00000370952 IQCA1Q86XH1 822 aa10.72□□□□□ -0.69
LRRC40-201ENST00000370952 VGLL2Q8N8G2 317 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms