RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 BLIDQ8IZY5 108 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 FAM177A1Q8N128 213 aaPredicted RBP12.57□□□□□ -0.4
BRCC3-204ENST00000369462 REPS2Q8NFH8 660 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 CHAMP1Q96JM3 812 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 PSTPIP2Q9H939 334 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 SMCHD1A6NHR9 2005 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 RLFQ13129 1914 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 ESYT2A0FGR8 921 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 ALAS1P13196 640 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 U2AF2P26368 475 aaKnown RBP eCLIP12.57□□□□□ -0.41e-9■■■□□ 15.6
BRCC3-204ENST00000369462 ADCY7P51828 1080 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 GALNT17Q6IS24 598 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 RASGRP4Q8TDF6 673 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 FOXP1Q9H334 677 aaPredicted RBP12.57□□□□□ -0.4
BRCC3-204ENST00000369462 HOMER2Q9NSB8 354 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 PNMA3Q9UL41 463 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 ZNF214Q9UL59 606 aaPredicted RBP12.57□□□□□ -0.4
BRCC3-204ENST00000369462 DEFB115Q30KQ5 88 aa12.56□□□□□ -0.4
BRCC3-204ENST00000369462 SNRNP48Q6IEG0 339 aaKnown RBP12.56□□□□□ -0.4
BRCC3-204ENST00000369462 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
BRCC3-204ENST00000369462 NOSTRINQ8IVI9 506 aa12.56□□□□□ -0.4
BRCC3-204ENST00000369462 SMCR8Q8TEV9 937 aaPredicted RBP12.56□□□□□ -0.4
BRCC3-204ENST00000369462 PAGR1Q9BTK6 254 aa12.56□□□□□ -0.4
BRCC3-204ENST00000369462 ATP6V1DQ9Y5K8 247 aa12.56□□□□□ -0.4
BRCC3-204ENST00000369462 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
BRCC3-204ENST00000369462 MRPL12P52815 198 aaKnown RBP12.56□□□□□ -0.4
BRCC3-204ENST00000369462 MB21D1Q8N884 522 aa12.56□□□□□ -0.4
BRCC3-204ENST00000369462 CUL5Q93034 780 aa12.56□□□□□ -0.4
BRCC3-204ENST00000369462 RIC8AQ9NPQ8 531 aa12.56□□□□□ -0.4
BRCC3-204ENST00000369462 BTBD7Q9P203 1132 aa12.56□□□□□ -0.4
BRCC3-204ENST00000369462 MRPL11Q9Y3B7 192 aaKnown RBP12.56□□□□□ -0.4
BRCC3-204ENST00000369462 RIPK3Q9Y572 518 aa12.56□□□□□ -0.4
BRCC3-204ENST00000369462 PARP14Q460N5 1801 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 OPLAHO14841 1288 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 STAT3P40763 770 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 OAZ1P54368 228 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 BRAPQ7Z569 592 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 REXO1Q8N1G1 1221 aaKnown RBP12.55□□□□□ -0.4
BRCC3-204ENST00000369462 DAGLBQ8NCG7 672 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 BICD2Q8TD16 824 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 ZIC5Q96T25 663 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 TEX13BQ9BXU2 312 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 BIN2Q9UBW5 565 aaPredicted RBP12.55□□□□□ -0.4
BRCC3-204ENST00000369462 SLC45A1Q9Y2W3 748 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 IGF2BP3O00425 579 aaKnown RBP eCLIP12.55□□□□□ -0.4
BRCC3-204ENST00000369462 UBE2SQ16763 222 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
BRCC3-204ENST00000369462 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
BRCC3-204ENST00000369462 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 ABCB11O95342 1321 aa12.55□□□□□ -0.4
BRCC3-204ENST00000369462 RASSF10A6NK89 507 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 ATP2A1O14983 1001 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 CFBP00751 764 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 INHBEP58166 350 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 DNM1Q05193 864 aaKnown RBP12.54□□□□□ -0.4
BRCC3-204ENST00000369462 JAKMIP3Q5VZ66 844 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 TNFRSF25Q93038 417 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 TRERF1Q96PN7 1200 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 TXNRD2Q9NNW7 524 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 RBPJLQ9UBG7 517 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 M0R2N6 131 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 NFIBO00712 420 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 CAPNS2Q96L46 248 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 GLT8D2Q9H1C3 349 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 TMEM260Q9NX78 707 aa12.54□□□□□ -0.4
BRCC3-204ENST00000369462 MEIS2O14770 477 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 HOXA13P31271 388 aaPredicted RBP12.53□□□□□ -0.4
BRCC3-204ENST00000369462 HTRA3P83110 453 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 MYSM1Q5VVJ2 828 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 SPATC1LQ9H0A9 340 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 RNF146Q9NTX7 359 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
BRCC3-204ENST00000369462 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 CCDC194A0A1B0GVG4 234 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
BRCC3-204ENST00000369462 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 NOGQ13253 232 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 CLEC4DQ8WXI8 215 aa12.53□□□□□ -0.4
BRCC3-204ENST00000369462 PARK7Q99497 189 aaKnown RBP12.53□□□□□ -0.4
BRCC3-204ENST00000369462 COL11A1P12107 1806 aaPredicted RBP12.53□□□□□ -0.4
BRCC3-204ENST00000369462 AOC2O75106 756 aa12.52□□□□□ -0.4
BRCC3-204ENST00000369462 CNMDO75829 334 aa12.52□□□□□ -0.4
BRCC3-204ENST00000369462 BAG4O95429 457 aaKnown RBP12.52□□□□□ -0.4
BRCC3-204ENST00000369462 ATP2B1P20020 1258 aa12.52□□□□□ -0.4
BRCC3-204ENST00000369462 Q3C1V9 767 aa12.52□□□□□ -0.4
BRCC3-204ENST00000369462 PGBD1Q96JS3 809 aa12.52□□□□□ -0.4
BRCC3-204ENST00000369462 CLK2P49760 499 aaKnown RBP12.52□□□□□ -0.41
BRCC3-204ENST00000369462 CEBPZQ03701 1054 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms