RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 ADAM30Q9UKF2 790 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 TNS3Q68CZ2 1445 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 IQGAP3Q86VI3 1631 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 CNTNAP4Q9C0A0 1308 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 RBAK-RBAKDNI3L0D1 243 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 GRIN3BO60391 1043 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 CST3P01034 146 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 GRIK1P39086 918 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 PDE4BQ07343 736 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 CYP27C1Q4G0S4 372 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 TMEM201Q5SNT2 666 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 SLC6A19Q695T7 634 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 DTX1Q86Y01 620 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 MCATQ8IVS2 390 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 NLGN2Q8NFZ4 835 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 RIN3Q8TB24 985 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 MICAL1Q8TDZ2 1067 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 SGSM3Q96HU1 749 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 SEC16BQ96JE7 1060 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 TMEM87BQ96K49 555 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 MTFR1LQ9H019 292 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 LRRC4CQ9HCJ2 640 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 GINM1Q9NU53 330 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 TERF2IPQ9NYB0 399 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 NAP1L2Q9ULW6 460 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 RRBP1Q9P2E9 1410 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 KANK1Q14678 1352 aa6.56□□□□□ -1.36
ECHDC1-204ENST00000368292 SCO2A0A1W2PP80 73 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 UPK3BL1B0FP48 263 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 UPK3BL2E5RIL1 263 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 PLCG1P19174 1290 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 NASPP49321 788 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 RALBP1Q15311 655 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 PTF1AQ7RTS3 328 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 MFSD2AQ8NA29 543 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 DPH2Q9BQC3 489 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 BRMS1Q9HCU9 246 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 ZFP64Q9NPA5 681 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 REV1Q9UBZ9 1251 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 EFR3BQ9Y2G0 817 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 TECPR2O15040 1411 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 PRAG1Q86YV5 1406 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 CRYBG1Q9Y4K1 1723 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 AATKQ6ZMQ8 1374 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 KIF1AQ12756 1690 aa6.55□□□□□ -1.36
ECHDC1-204ENST00000368292 CCDC144AA2RUR9 1427 aa6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 DNAJA2O60884 412 aa6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 HTR3BO95264 441 aa6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 SOX9P48436 509 aa6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 CWF19L2Q2TBE0 894 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 DIEXFQ68CQ4 756 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 FAM9BQ8IZU0 186 aa6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 FAM181AQ8N9Y4 354 aa6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 SECISBP2LQ93073 1101 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 ANP32EQ9BTT0 268 aa6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 PCMTD2Q9NV79 361 aa6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 PAPPAQ13219 1627 aa6.54□□□□□ -1.36
ECHDC1-204ENST00000368292 ARHGEF28Q8N1W1 1705 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 SPATA31A1Q5TZJ5 1347 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 E9PCH4 1651 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 PLSCR1O15162 318 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 ATE1O95260 518 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 HSPA1AP0DMV8 641 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 HSPA1BP0DMV9 641 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 OXCT1P55809 520 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 SEZ6Q53EL9 994 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 APBB1IPQ7Z5R6 666 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 SLITRK4Q8IW52 837 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 MORC4Q8TE76 937 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 IPO4Q8TEX9 1081 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 MIPEPQ99797 713 aa6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 RGPD8O14715 1765 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-204ENST00000368292 CHURC1-FNTBB4DL54 471 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 IGF2BP3O00425 579 aaKnown RBP eCLIP6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 STK10O94804 968 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 CLCQ05315 142 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 APOBRQ0VD83 1088 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 CCDC144BQ3MJ40 725 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 LETMD1Q6P1Q0 360 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 NFXL1Q6ZNB6 911 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 PLD6Q8N2A8 252 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 PMFBP1Q8TBY8 1022 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 PPP1R13LQ8WUF5 828 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 NKD1Q969G9 470 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 EHMT1Q9H9B1 1298 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 MKNK2Q9HBH9 465 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 RRP7BPQ9NSQ0 103 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 PLAGL2Q9UPG8 496 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 PCDHB14Q9Y5E9 798 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 FMN2Q9NZ56 1722 aa6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 LRPPRCP42704 1394 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-204ENST00000368292 PARP4Q9UKK3 1724 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 RAB11FIP3O75154 756 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 PRNPP04156 253 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 COL9A2Q14055 689 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 SLC15A2Q16348 729 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 GIMAP6Q6P9H5 292 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 KRT28Q7Z3Y7 464 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms