RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 KATNBL1Q9H079 304 aa9.65□□□□□ -0.86
RNU4-59P-201ENST00000364447 AP5M1Q9H0R1 490 aa9.65□□□□□ -0.86
RNU4-59P-201ENST00000364447 CYP39A1Q9NYL5 469 aa9.65□□□□□ -0.86
RNU4-59P-201ENST00000364447 ZMYM6O95789 1325 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 ARVCFO00192 962 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 TIMP1P01033 207 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 FGAP02671 866 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 ICAM1P05362 532 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 TOP1P11387 765 aaKnown RBP9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 SLC16A2P36021 539 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 CDK7P50613 346 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 MFAP1P55081 439 aaKnown RBP9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 BEX3Q00994 111 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 NMIQ13287 307 aaPredicted RBP9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 PPIGQ13427 754 aaKnown RBP eCLIP9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 EEPD1Q7L9B9 569 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 TICAM2Q86XR7 235 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 FBXO16Q8IX29 292 aaPredicted RBP9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 TMEM199Q8N511 208 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 RILPL2Q969X0 211 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 LNPKQ9C0E8 428 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 SEMA6BQ9H3T3 888 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 GPCPD1Q9NPB8 672 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 TBX21Q9UL17 535 aa9.64□□□□□ -0.87
RNU4-59P-201ENST00000364447 FRMPD2Q68DX3 1309 aaPredicted RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 CCDC171Q6TFL3 1326 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 TMEM265A0A087WTH1 108 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 PTPDC1A2A3K4 754 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 ZEB2O60315 1214 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 CABYRO75952 493 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 FGRP09769 529 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 HSPD1P10809 573 aaKnown RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 FOSL2P15408 326 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 NOVP48745 357 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 HAND2P61296 217 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 FSCN1Q16658 493 aaKnown RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 SYDE2Q5VT97 1194 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 IQSEC1Q6DN90 963 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 TTBK2Q6IQ55 1244 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 MFSD5Q6N075 450 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 CXCL17Q6UXB2 119 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 MFSD6Q6ZSS7 791 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 ZNF589Q86UQ0 364 aaPredicted RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 FAM126BQ8IXS8 530 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 MAFAQ8NHW3 353 aaPredicted RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 MYLIPQ8WY64 445 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 TMEM47Q9BQJ4 181 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 PPP1R12CQ9BZL4 782 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 RANBP17Q9H2T7 1088 aaKnown RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 TTYH1Q9H313 450 aaPredicted RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 VTA1Q9NP79 307 aa9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 ADD3Q9UEY8 706 aaKnown RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 DDX49Q9Y6V7 483 aaKnown RBP9.63□□□□□ -0.87
RNU4-59P-201ENST00000364447 MYH6P13533 1939 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 ASTN1O14525 1302 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 LAMA2P24043 3122 aaKnown RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 NFIBO00712 420 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 CTAGE5O15320 804 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 PCP11498 1178 aaKnown RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 CSF2RAP15509 400 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 SMPD1P17405 629 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 DNAJB2P25686 324 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 NKX3-2P78367 333 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 CACNB1Q02641 598 aaPredicted RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 AAMPQ13685 434 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 BAATQ14032 418 aaPredicted RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 AKNAD1Q5T1N1 836 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 PSRC1Q6PGN9 363 aaPredicted RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 BTNL9Q6UXG8 535 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 KIAA1211Q6ZU35 1233 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 RWDD1Q9H446 243 aaPredicted RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 RNF41Q9H4P4 317 aaPredicted RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 PDGFCQ9NRA1 345 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 TCP11L1Q9NUJ3 509 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 PNMA2Q9UL42 364 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 GNEQ9Y223 722 aaKnown RBP9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 Q9Y3F1 56 aa9.62□□□□□ -0.87
RNU4-59P-201ENST00000364447 CD4P01730 458 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 PDHBP11177 359 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 CALML3P27482 149 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 CYP2C18P33260 490 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 ALDH5A1P51649 535 aaPredicted RBP9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 ITGA7Q13683 1181 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 TMEM240Q5SV17 173 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 B4GALNT3Q6L9W6 998 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 TAPT1Q6NXT6 567 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 SLC30A10Q6XR72 485 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 TBC1D10CQ8IV04 446 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 ESR2Q92731 530 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 YTHDC1Q96MU7 727 aaKnown RBP9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 TTC14Q96N46 770 aa9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 PURBQ96QR8 312 aaKnown RBP9.61□□□□□ -0.87
RNU4-59P-201ENST00000364447 SEZ6LQ9BYH1 1024 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms