RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SHISA4Q96DD7 197 aa23.74■■□□□ 1.39
SHISA4-201ENST00000362011 EFCC1Q9HA90 598 aa23.74■■□□□ 1.39
SHISA4-201ENST00000362011 MYPNQ86TC9 1320 aa23.73■■□□□ 1.39
SHISA4-201ENST00000362011 PPP1R11O60927 126 aaPredicted RBP23.73■■□□□ 1.39
SHISA4-201ENST00000362011 GTF2A2P52657 109 aa23.73■■□□□ 1.39
SHISA4-201ENST00000362011 NLRP5P59047 1200 aa23.73■■□□□ 1.39
SHISA4-201ENST00000362011 TRAF1Q13077 416 aa23.73■■□□□ 1.39
SHISA4-201ENST00000362011 TREML2Q5T2D2 321 aa23.73■■□□□ 1.39
SHISA4-201ENST00000362011 PPP1R18Q6NYC8 613 aa23.73■■□□□ 1.39
SHISA4-201ENST00000362011 COA7Q96BR5 231 aa23.73■■□□□ 1.39
SHISA4-201ENST00000362011 AMNQ9BXJ7 453 aa23.73■■□□□ 1.39
SHISA4-201ENST00000362011 AGTPBP1Q9UPW5 1226 aa23.73■■□□□ 1.39
SHISA4-201ENST00000362011 BRCA2P51587 3418 aa23.72■■□□□ 1.39
SHISA4-201ENST00000362011 CETPP11597 493 aa23.72■■□□□ 1.39
SHISA4-201ENST00000362011 CALML3P27482 149 aa23.72■■□□□ 1.39
SHISA4-201ENST00000362011 DSG3P32926 999 aa23.72■■□□□ 1.39
SHISA4-201ENST00000362011 PABPC4Q13310 644 aaKnown RBP eCLIP23.72■■□□□ 1.39
SHISA4-201ENST00000362011 MOGSQ13724 837 aa23.72■■□□□ 1.39
SHISA4-201ENST00000362011 COG2Q14746 738 aa23.72■■□□□ 1.39
SHISA4-201ENST00000362011 FERMT3Q86UX7 667 aa23.72■■□□□ 1.39
SHISA4-201ENST00000362011 BRI3BPQ8WY22 251 aa23.72■■□□□ 1.39
SHISA4-201ENST00000362011 ZSCAN16Q9H4T2 348 aaPredicted RBP23.72■■□□□ 1.39
SHISA4-201ENST00000362011 BRMS1Q9HCU9 246 aa23.72■■□□□ 1.39
SHISA4-201ENST00000362011 CTDP1Q9Y5B0 961 aaPredicted RBP23.72■■□□□ 1.39
SHISA4-201ENST00000362011 HOXA7P31268 230 aaPredicted RBP23.71■■□□□ 1.39
SHISA4-201ENST00000362011 RESTQ13127 1097 aa23.71■■□□□ 1.39
SHISA4-201ENST00000362011 GALNT17Q6IS24 598 aa23.71■■□□□ 1.39
SHISA4-201ENST00000362011 TYW1BQ6NUM6 668 aa23.71■■□□□ 1.39
SHISA4-201ENST00000362011 CCDC174Q6PII3 467 aa23.71■■□□□ 1.39
SHISA4-201ENST00000362011 TNPO1Q92973 898 aaKnown RBP23.71■■□□□ 1.39
SHISA4-201ENST00000362011 MYH7BA7E2Y1 1941 aa23.71■■□□□ 1.39
SHISA4-201ENST00000362011 ESYT2A0FGR8 921 aa23.7■■□□□ 1.38
SHISA4-201ENST00000362011 ZBED4O75132 1171 aa23.7■■□□□ 1.38
SHISA4-201ENST00000362011 KRT2P35908 639 aa23.7■■□□□ 1.38
SHISA4-201ENST00000362011 GNL2Q13823 731 aaKnown RBP23.7■■□□□ 1.38
SHISA4-201ENST00000362011 DIS3L2Q8IYB7 885 aaKnown RBP23.7■■□□□ 1.38
SHISA4-201ENST00000362011 ATG4CQ96DT6 458 aa23.7■■□□□ 1.38
SHISA4-201ENST00000362011 SLC38A10Q9HBR0 1119 aa23.7■■□□□ 1.38
SHISA4-201ENST00000362011 HOXC10Q9NYD6 342 aa23.7■■□□□ 1.38
SHISA4-201ENST00000362011 CCL15-CCL14A0A0B4J2E2 113 aa23.69■■□□□ 1.38
SHISA4-201ENST00000362011 IRX3P78415 501 aaPredicted RBP23.69■■□□□ 1.38
SHISA4-201ENST00000362011 CCL15Q16663 113 aa23.69■■□□□ 1.38
SHISA4-201ENST00000362011 ZMYND12Q9H0C1 365 aa23.69■■□□□ 1.38
SHISA4-201ENST00000362011 C6orf50Q9HD87 102 aa23.69■■□□□ 1.38
SHISA4-201ENST00000362011 PCDHA1Q9Y5I3 950 aa23.69■■□□□ 1.38
SHISA4-201ENST00000362011 ATP6V1DQ9Y5K8 247 aa23.69■■□□□ 1.38
SHISA4-201ENST00000362011 SMCO2A6NFE2 343 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 VWA5AO00534 786 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 OSBPP22059 807 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 GNA11P29992 359 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 USH1GQ495M9 461 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 GPAT2Q6NUI2 795 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 BLIDQ8IZY5 108 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 DAGLBQ8NCG7 672 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 ZNF333Q96JL9 665 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 FOXP1Q9H334 677 aaPredicted RBP23.68■■□□□ 1.38
SHISA4-201ENST00000362011 PNMA2Q9UL42 364 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 PCDHA4Q9UN74 947 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 ADAMTS5Q9UNA0 930 aa23.68■■□□□ 1.38
SHISA4-201ENST00000362011 SPDYE16A6NNV3 312 aaPredicted RBP23.67■■□□□ 1.38
SHISA4-201ENST00000362011 ICAM1P05362 532 aa23.67■■□□□ 1.38
SHISA4-201ENST00000362011 EN2P19622 333 aaPredicted RBP23.67■■□□□ 1.38
SHISA4-201ENST00000362011 NPY5RQ15761 445 aa23.67■■□□□ 1.38
SHISA4-201ENST00000362011 HABP4Q5JVS0 413 aaKnown RBP23.67■■□□□ 1.38
SHISA4-201ENST00000362011 BRAPQ7Z569 592 aa23.67■■□□□ 1.38
SHISA4-201ENST00000362011 ABCB11O95342 1321 aa23.67■■□□□ 1.38
SHISA4-201ENST00000362011 ZNFX1Q9P2E3 1918 aaKnown RBP23.66■■□□□ 1.38
SHISA4-201ENST00000362011 BTBD18B2RXH4 712 aa23.66■■□□□ 1.38
SHISA4-201ENST00000362011 KIF28PB7ZC32 967 aa23.66■■□□□ 1.38
SHISA4-201ENST00000362011 U2AF2P26368 475 aaKnown RBP eCLIP23.66■■□□□ 1.38
SHISA4-201ENST00000362011 ADCY7P51828 1080 aa23.66■■□□□ 1.38
SHISA4-201ENST00000362011 FAM43AQ8N2R8 423 aa23.66■■□□□ 1.38
SHISA4-201ENST00000362011 BICD2Q8TD16 824 aa23.66■■□□□ 1.38
SHISA4-201ENST00000362011 ASCC2Q9H1I8 757 aaPredicted RBP23.66■■□□□ 1.38
SHISA4-201ENST00000362011 ZFYVE28Q9HCC9 887 aa23.66■■□□□ 1.38
SHISA4-201ENST00000362011 PNMA3Q9UL41 463 aa23.66■■□□□ 1.38
SHISA4-201ENST00000362011 CCPG1Q9ULG6 757 aa23.66■■□□□ 1.38
SHISA4-201ENST00000362011 KIAA0100Q14667 2235 aaKnown RBP23.66■■□□□ 1.38
SHISA4-201ENST00000362011 ZNF536O15090 1300 aa23.66■■□□□ 1.38
SHISA4-201ENST00000362011 OAZ1P54368 228 aa23.65■■□□□ 1.38
SHISA4-201ENST00000362011 TAF1CQ15572 869 aaPredicted RBP23.65■■□□□ 1.38
SHISA4-201ENST00000362011 ANKRD23Q86SG2 305 aa23.65■■□□□ 1.38
SHISA4-201ENST00000362011 CPXCR1Q8N123 301 aa23.65■■□□□ 1.38
SHISA4-201ENST00000362011 OXER1Q8TDS5 423 aa23.65■■□□□ 1.38
SHISA4-201ENST00000362011 GLT8D2Q9H1C3 349 aa23.65■■□□□ 1.38
SHISA4-201ENST00000362011 RAVER2Q9HCJ3 691 aaKnown RBP23.65■■□□□ 1.38
SHISA4-201ENST00000362011 ZCCHC17Q9NP64 241 aaKnown RBP23.65■■□□□ 1.38
SHISA4-201ENST00000362011 RIC8AQ9NPQ8 531 aa23.65■■□□□ 1.38
SHISA4-201ENST00000362011 SLC45A1Q9Y2W3 748 aa23.65■■□□□ 1.38
SHISA4-201ENST00000362011 NR5A1Q13285 461 aa23.64■■□□□ 1.38
SHISA4-201ENST00000362011 ARHGEF6Q15052 776 aa23.64■■□□□ 1.38
SHISA4-201ENST00000362011 LBX2Q6XYB7 198 aa23.64■■□□□ 1.38
SHISA4-201ENST00000362011 NOSTRINQ8IVI9 506 aa23.64■■□□□ 1.38
SHISA4-201ENST00000362011 REPS2Q8NFH8 660 aa23.64■■□□□ 1.38
SHISA4-201ENST00000362011 CUL5Q93034 780 aa23.64■■□□□ 1.38
SHISA4-201ENST00000362011 MRPL11Q9Y3B7 192 aaKnown RBP23.64■■□□□ 1.38
SHISA4-201ENST00000362011 BTBD19C9JJ37 291 aa23.63■■□□□ 1.37
SHISA4-201ENST00000362011 MRPL12P52815 198 aaKnown RBP23.63■■□□□ 1.37
SHISA4-201ENST00000362011 HERVK_113P62684 666 aa23.63■■□□□ 1.37
SHISA4-201ENST00000362011 FOXD4L6Q3SYB3 417 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms