RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SASH3O75995 380 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 PLCB3Q01970 1234 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 DHX9Q08211 1270 aaKnown RBP17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 TNIP1Q15025 636 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 MUM1Q2TAK8 710 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 FAM133BQ5BKY9 247 aaKnown RBP17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 MYOCDQ8IZQ8 938 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 THAP9Q9H5L6 903 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 YY1AP1Q9H869 796 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 ATP8A1Q9Y2Q0 1164 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 LRRD1A4D1F6 860 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 LGALS16A8MUM7 142 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 EXOC5O00471 708 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 FAM13AO94988 1023 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 H2AFZP0C0S5 128 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 TRAPPC10P48553 1259 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 ZKSCAN8Q15776 578 aaPredicted RBP17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 H2AFVQ71UI9 128 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 KCNB2Q92953 911 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 PARP2Q9UGN5 583 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 SUFUQ9UMX1 484 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 CIAO1O76071 339 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 ZRANB2O95218 330 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 GLE1Q53GS7 698 aaKnown RBP17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 FAM47AQ5JRC9 791 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 FYB2Q5VWT5 728 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 NLRP14Q86W24 1093 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 MB21D2Q8IYB1 491 aaPredicted RBP17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 CRB1P82279 1406 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 PDE8AO60658 829 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 EEF2P13639 858 aaKnown RBP17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 ADD2P35612 726 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 RASSF2P50749 326 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 FXR1P51114 621 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 NR1I3Q14994 352 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 CCDC174Q6PII3 467 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 TBC1D1Q86TI0 1168 aaPredicted RBP17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 SDR42E1Q8WUS8 393 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
CLSTN1-201ENST00000361311 CTDNEP1O95476 244 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 HNRNPH1P31943 449 aaKnown RBP17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 CCNE1P24864 410 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 TECP42680 631 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 RFX7Q2KHR2 1363 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 ABCB4P21439 1286 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 CALCRLQ16602 461 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 NBPF9Q3BBW0 867 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 SLF2Q8IX21 1173 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 CHP1Q99653 195 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 CNOT10Q9H9A5 744 aaKnown RBP17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 LCMT1Q9UIC8 334 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 ESYT3A0FGR9 886 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 SMIM24O75264 130 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 CHGBP05060 677 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 GSTO1P78417 241 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 CLUL1Q15846 466 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 CCNI2Q6ZMN8 369 aaPredicted RBP17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 CABLES1Q8TDN4 633 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 MRRFQ96E11 262 aaKnown RBP17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 CEP63Q96MT8 703 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 FAM114A2Q9NRY5 505 aa17.56■□□□□ 0.4
CLSTN1-201ENST00000361311 FAM170AA1A519 330 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 PHKA1P46020 1223 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 GUCY1A3Q02108 690 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 ZNF365Q70YC5 407 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 RNF17Q9BXT8 1623 aaKnown RBP17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 PGRMC1O00264 195 aaKnown RBP17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 CUL4BQ13620 913 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 MAN2A1Q16706 1144 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 TRIM65Q6PJ69 517 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 RSRC2Q7L4I2 434 aaKnown RBP17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 VPS52Q8N1B4 723 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 GMNCA6NCL1 334 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 USP17L12C9JPN9 530 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 USP17L21D6R901 530 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 GNA14O95837 355 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 ST3GAL1Q11201 340 aa17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.4
CLSTN1-201ENST00000361311 YEATS2Q9ULM3 1422 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 SH2D3CQ8N5H7 860 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 NIP7Q9Y221 180 aaKnown RBP eCLIP17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 TRIM49BA6NDI0 452 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 PPP1R37O75864 691 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 FDPSP14324 419 aaKnown RBP17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 CDC27P30260 824 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 MSANTD4Q8NCY6 345 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 ADD3Q9UEY8 706 aaKnown RBP17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 STAT1P42224 750 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 NFRKBQ6P4R8 1299 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 PARP9Q8IXQ6 854 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 SPATA4Q8NEY3 305 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 OSBPL9Q96SU4 736 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 MLXIPQ9HAP2 919 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 JAG2Q9Y219 1238 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 HHATQ5VTY9 493 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 GBP5Q96PP8 586 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms