RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 CATSPERGQ6ZRH7 1159 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 OPTNQ96CV9 577 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 TMEM260Q9NX78 707 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 A0A0G2JLL6 359 aaPredicted RBP17.81■□□□□ 0.44
CTSA-202ENST00000354880 USP17L15C9J2P7 530 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 USP17L13C9JLJ4 530 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 USP17L11C9JVI0 530 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 USP17L18D6R9N7 530 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 USP17L22D6RA61 530 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 USP17L17D6RBQ6 530 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 USP17L19D6RCP7 530 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 USP17L20D6RJB6 530 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 WNT7AO00755 349 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 BMP15O95972 392 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 ICAM1P05362 532 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 TAL1P17542 331 aaPredicted RBP17.81■□□□□ 0.44
CTSA-202ENST00000354880 USP17L24Q0WX57 530 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 ADALQ6DHV7 355 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 PRRT2Q7Z6L0 340 aaPredicted RBP17.81■□□□□ 0.44
CTSA-202ENST00000354880 GBA2Q9HCG7 927 aaPredicted RBP17.81■□□□□ 0.44
CTSA-202ENST00000354880 KCNH4Q9UQ05 1017 aa17.81■□□□□ 0.44
CTSA-202ENST00000354880 ZNF536O15090 1300 aa17.8■□□□□ 0.44
CTSA-202ENST00000354880 RLFQ13129 1914 aa17.8■□□□□ 0.44
CTSA-202ENST00000354880 ZBED4O75132 1171 aa17.8■□□□□ 0.44
CTSA-202ENST00000354880 CELF2O95319 508 aaKnown RBP17.8■□□□□ 0.44
CTSA-202ENST00000354880 COG2Q14746 738 aa17.8■□□□□ 0.44
CTSA-202ENST00000354880 CHADLQ6NUI6 762 aa17.8■□□□□ 0.44
CTSA-202ENST00000354880 SLC10A4Q96EP9 437 aa17.8■□□□□ 0.44
CTSA-202ENST00000354880 MRPL11Q9Y3B7 192 aaKnown RBP17.8■□□□□ 0.44
CTSA-202ENST00000354880 CTDP1Q9Y5B0 961 aaPredicted RBP17.8■□□□□ 0.44
CTSA-202ENST00000354880 ABCB11O95342 1321 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 VWA5AO00534 786 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 MEIS2O14770 477 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 DSG3P32926 999 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 ZNF174Q15697 407 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 CAVIN1Q6NZI2 390 aaKnown RBP17.79■□□□□ 0.44
CTSA-202ENST00000354880 USP17L6PQ6QN14 398 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 TEX2Q8IWB9 1127 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 C2orf69Q8N8R5 385 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 PROCA1Q8NCQ7 364 aaPredicted RBP17.79■□□□□ 0.44
CTSA-202ENST00000354880 TBCKQ8TEA7 893 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 ATG4CQ96DT6 458 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 CCPG1Q9ULG6 757 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 MORC2Q9Y6X9 1032 aaPredicted RBP17.79■□□□□ 0.44
CTSA-202ENST00000354880 OPLAHO14841 1288 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 MCTP2Q6DN12 878 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 NEK8Q86SG6 692 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 AGBL1Q96MI9 1066 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 GZF1Q9H116 711 aaPredicted RBP17.79■□□□□ 0.44
CTSA-202ENST00000354880 HOXC10Q9NYD6 342 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 LOC285556D6RIA3 1793 aa17.79■□□□□ 0.44
CTSA-202ENST00000354880 MYPNQ86TC9 1320 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 A0A1W2PQ27 194 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 A0A1W2PQ64 194 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 A0A1W2PQD8 194 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 ITGBL1O95965 494 aaPredicted RBP17.78■□□□□ 0.44
CTSA-202ENST00000354880 MCM7P33993 719 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 AP3B2Q13367 1082 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 AXDND1Q5T1B0 1012 aaPredicted RBP17.78■□□□□ 0.44
CTSA-202ENST00000354880 TREML2Q5T2D2 321 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 GADL1Q6ZQY3 521 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 CPXCR1Q8N123 301 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 KRI1Q8N9T8 703 aaKnown RBP17.78■□□□□ 0.44
CTSA-202ENST00000354880 RAVER2Q9HCJ3 691 aaKnown RBP17.78■□□□□ 0.44
CTSA-202ENST00000354880 PNMA2Q9UL42 364 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 ADAMTS5Q9UNA0 930 aa17.78■□□□□ 0.44
CTSA-202ENST00000354880 PIK3CDO00329 1044 aa17.77■□□□□ 0.44
CTSA-202ENST00000354880 PTGDRQ13258 359 aa17.77■□□□□ 0.44
CTSA-202ENST00000354880 LETM2Q2VYF4 491 aa17.77■□□□□ 0.44
CTSA-202ENST00000354880 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.44
CTSA-202ENST00000354880 WNK4Q96J92 1243 aa17.77■□□□□ 0.44
CTSA-202ENST00000354880 CUTAO60888 179 aa17.77■□□□□ 0.43
CTSA-202ENST00000354880 LIG1P18858 919 aa17.77■□□□□ 0.43
CTSA-202ENST00000354880 PTPREP23469 700 aa17.77■□□□□ 0.43
CTSA-202ENST00000354880 HOXA7P31268 230 aaPredicted RBP17.77■□□□□ 0.43
CTSA-202ENST00000354880 GJA5P36382 358 aa17.77■□□□□ 0.43
CTSA-202ENST00000354880 ATP2C1P98194 919 aaPredicted RBP17.77■□□□□ 0.43
CTSA-202ENST00000354880 SYAP1Q96A49 352 aaPredicted RBP17.77■□□□□ 0.43
CTSA-202ENST00000354880 TMEM63CQ9P1W3 806 aa17.77■□□□□ 0.43
CTSA-202ENST00000354880 FBXO2Q9UK22 296 aaPredicted RBP17.77■□□□□ 0.43
CTSA-202ENST00000354880 SRPRBQ9Y5M8 271 aaKnown RBP17.77■□□□□ 0.43
CTSA-202ENST00000354880 COL11A1P12107 1806 aaPredicted RBP17.76■□□□□ 0.43
CTSA-202ENST00000354880 SPDYE16A6NNV3 312 aaPredicted RBP17.76■□□□□ 0.43
CTSA-202ENST00000354880 CCNT1O60563 726 aaKnown RBP17.76■□□□□ 0.43
CTSA-202ENST00000354880 CFBP00751 764 aa17.76■□□□□ 0.43
CTSA-202ENST00000354880 FOSP01100 380 aaPredicted RBP17.76■□□□□ 0.43
CTSA-202ENST00000354880 FASTKD5Q7L8L6 764 aaKnown RBP17.76■□□□□ 0.43
CTSA-202ENST00000354880 FSIP1Q8NA03 581 aa17.76■□□□□ 0.43
CTSA-202ENST00000354880 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
CTSA-202ENST00000354880 MRPS27Q92552 414 aaKnown RBP17.76■□□□□ 0.43
CTSA-202ENST00000354880 CLIC6Q96NY7 704 aa17.76■□□□□ 0.43
CTSA-202ENST00000354880 ANO3Q9BYT9 981 aa17.76■□□□□ 0.43
CTSA-202ENST00000354880 SPDYE3A6NKU9 549 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 GCOM1H8Y6P7 765 aaPredicted RBP17.75■□□□□ 0.43
CTSA-202ENST00000354880 POLR2MP0CAP2 368 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 ALAS1P13196 640 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 CMA1P23946 247 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 OAZ1P54368 228 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 ORC2Q13416 577 aaPredicted RBP17.75■□□□□ 0.43
CTSA-202ENST00000354880 SNAPC2Q13487 334 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms