RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 MEIS1O00470 390 aa12.52□□□□□ -0.41
SVIP-201ENST00000354193 RCAN1P53805 252 aa12.52□□□□□ -0.41
SVIP-201ENST00000354193 RESP18Q5W5W9 173 aa12.52□□□□□ -0.41
SVIP-201ENST00000354193 TRIM47Q96LD4 638 aa12.52□□□□□ -0.41
SVIP-201ENST00000354193 ASNSP08243 561 aa12.52□□□□□ -0.41
SVIP-201ENST00000354193 EPS15P42566 896 aa12.52□□□□□ -0.41
SVIP-201ENST00000354193 NLRP12P59046 1061 aa12.52□□□□□ -0.41
SVIP-201ENST00000354193 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.41
SVIP-201ENST00000354193 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.41
SVIP-201ENST00000354193 GOLGA8FQ08AF8 430 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 GOLGA8DPQ0D2H9 430 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
SVIP-201ENST00000354193 CHURC1Q8WUH1 139 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 EXOC1Q9NV70 894 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 PRKCSHP14314 528 aaPredicted RBP12.51□□□□□ -0.41
SVIP-201ENST00000354193 MYL5Q02045 173 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
SVIP-201ENST00000354193 ENGASEQ8NFI3 743 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 IRS2Q9Y4H2 1338 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 THSD7AQ9UPZ6 1657 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 A0A1W2PRG0 241 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 ENTPD3O75355 529 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 METTL16Q86W50 562 aaKnown RBP12.51□□□□□ -0.41
SVIP-201ENST00000354193 C7orf43Q8WVR3 580 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 XPO4Q9C0E2 1151 aaKnown RBP12.51□□□□□ -0.41
SVIP-201ENST00000354193 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
SVIP-201ENST00000354193 MAGEC2Q9UBF1 373 aaPredicted RBP12.51□□□□□ -0.41
SVIP-201ENST00000354193 BRWD3Q6RI45 1802 aa12.51□□□□□ -0.41
SVIP-201ENST00000354193 NFKBIEO00221 500 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 PDE4DQ08499 809 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 C16orf45Q96MC5 204 aaPredicted RBP12.5□□□□□ -0.41
SVIP-201ENST00000354193 RAVER2Q9HCJ3 691 aaKnown RBP12.5□□□□□ -0.41
SVIP-201ENST00000354193 TNRC6CQ9HCJ0 1690 aaKnown RBP12.5□□□□□ -0.41
SVIP-201ENST00000354193 MTMR2Q13614 643 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 FILIP1LQ4L180 1135 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 TBC1D5Q92609 795 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 SHISA4Q96DD7 197 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 VPS16Q9H269 839 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 HMGCS2P54868 508 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 DDX60Q8IY21 1712 aaKnown RBP12.5□□□□□ -0.41
SVIP-201ENST00000354193 N4BP3O15049 544 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 VIL1P09327 827 aaKnown RBP12.5□□□□□ -0.41
SVIP-201ENST00000354193 FGRP09769 529 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 SFPQP23246 707 aaKnown RBP eCLIP12.5□□□□□ -0.41
SVIP-201ENST00000354193 STAT3P40763 770 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 HDLBPQ00341 1268 aaKnown RBP12.5□□□□□ -0.41
SVIP-201ENST00000354193 CUL4BQ13620 913 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 HPS3Q969F9 1004 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 PSMD1Q99460 953 aa12.5□□□□□ -0.41
SVIP-201ENST00000354193 FAM170AA1A519 330 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 PLCG1P19174 1290 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 JAG1P78504 1218 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 DCPSQ96C86 337 aaKnown RBP12.49□□□□□ -0.41
SVIP-201ENST00000354193 HERC5Q9UII4 1024 aaKnown RBP12.49□□□□□ -0.41
SVIP-201ENST00000354193 PRR12Q9ULL5 1215 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 ZNF75DP51815 510 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 GABPAQ06546 454 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 HOOK2Q96ED9 719 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 IDI2Q9BXS1 227 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 ANO3Q9BYT9 981 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 MAN1B1Q9UKM7 699 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 GDAQ9Y2T3 454 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 KCNA3P22001 575 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 FANCCQ00597 558 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 SH2D3AQ9BRG2 576 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 SLC39A2Q9NP94 309 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 TPM1P09493 284 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 NELFCDQ8IXH7 590 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 AGBL3Q8NEM8 1001 aa12.49□□□□□ -0.41
SVIP-201ENST00000354193 TESPA1A2RU30 521 aaPredicted RBP12.48□□□□□ -0.41
SVIP-201ENST00000354193 EIF2AK2P19525 551 aaKnown RBP12.48□□□□□ -0.41
SVIP-201ENST00000354193 GADL1Q6ZQY3 521 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
SVIP-201ENST00000354193 TPH2Q8IWU9 490 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 KIAA1024Q9UPX6 916 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 MCM6Q14566 821 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 RRP1BQ14684 758 aaKnown RBP12.48□□□□□ -0.41
SVIP-201ENST00000354193 LRRC41Q15345 812 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 DCAF15Q66K64 600 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 SAMSN1Q9NSI8 373 aaKnown RBP12.48□□□□□ -0.41
SVIP-201ENST00000354193 SLFN14P0C7P3 912 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 ATP2C1P98194 919 aaPredicted RBP12.48□□□□□ -0.41
SVIP-201ENST00000354193 TSR1Q2NL82 804 aaKnown RBP12.48□□□□□ -0.41
SVIP-201ENST00000354193 SV2BQ7L1I2 683 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 PPFIBP1Q86W92 1011 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 AGBL1Q96MI9 1066 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 MMRN2Q9H8L6 949 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 NYAP2Q9P242 653 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 ZKSCAN5Q9Y2L8 839 aa12.48□□□□□ -0.41
SVIP-201ENST00000354193 AP5Z1O43299 807 aa12.47□□□□□ -0.41
SVIP-201ENST00000354193 TPM2P07951 284 aa12.47□□□□□ -0.41
SVIP-201ENST00000354193 MTIF2P46199 727 aaKnown RBP12.47□□□□□ -0.41
SVIP-201ENST00000354193 TRAPPC10P48553 1259 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 804.1 ms