RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 PLEKP08567 350 aaPredicted RBP16.3■□□□□ 0.2
SMTN-202ENST00000347557 C2orf54Q08AI8 447 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 DYMQ7RTS9 669 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 ANKRD13CQ8N6S4 541 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 C4orf32Q8N8J7 132 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
SMTN-202ENST00000347557 NHEJ1Q9H9Q4 299 aaPredicted RBP16.3■□□□□ 0.2
SMTN-202ENST00000347557 PCDHA6Q9UN73 950 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 PCDHA8Q9Y5H6 950 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 ORC4O43929 436 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 ACTN2P35609 894 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 CYLC1P35663 651 aaPredicted RBP16.3■□□□□ 0.2
SMTN-202ENST00000347557 STK4Q13043 487 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 TUBB2AQ13885 445 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 ANKRD40Q6AI12 368 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 CCDC47Q96A33 483 aaKnown RBP16.3■□□□□ 0.2
SMTN-202ENST00000347557 TUBB2BQ9BVA1 445 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 DEF6Q9H4E7 631 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 ANKIB1Q9P2G1 1089 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 SRP68Q9UHB9 627 aaKnown RBP16.3■□□□□ 0.2
SMTN-202ENST00000347557 CXCR5P32302 372 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 NAP1L1P55209 391 aaKnown RBP16.3■□□□□ 0.2
SMTN-202ENST00000347557 KRT83P78385 493 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 AMPD2Q01433 879 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 ARL6IP4Q66PJ3 421 aaKnown RBP16.3■□□□□ 0.2
SMTN-202ENST00000347557 LRRC15Q8TF66 581 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 ACBD3Q9H3P7 528 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 MMRN2Q9H8L6 949 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 ATP8A2Q9NTI2 1148 aa16.3■□□□□ 0.2
SMTN-202ENST00000347557 ARPP21Q9UBL0 812 aaPredicted RBP16.3■□□□□ 0.2
SMTN-202ENST00000347557 TXKP42681 527 aa16.29■□□□□ 0.2
SMTN-202ENST00000347557 ENOX2Q16206 610 aaKnown RBP16.29■□□□□ 0.2
SMTN-202ENST00000347557 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
SMTN-202ENST00000347557 NBPF5PQ86XG9 351 aaPredicted RBP16.29■□□□□ 0.2
SMTN-202ENST00000347557 SH3RF3Q8TEJ3 882 aaPredicted RBP16.29■□□□□ 0.2
SMTN-202ENST00000347557 CCDC42Q96M95 316 aa16.29■□□□□ 0.2
SMTN-202ENST00000347557 MYO1AQ9UBC5 1043 aa16.29■□□□□ 0.2
SMTN-202ENST00000347557 DNM2P50570 870 aa16.29■□□□□ 0.2
SMTN-202ENST00000347557 TMED8Q6PL24 325 aaPredicted RBP16.29■□□□□ 0.2
SMTN-202ENST00000347557 MARCH10Q8NA82 808 aaPredicted RBP16.29■□□□□ 0.2
SMTN-202ENST00000347557 GOLGA5Q8TBA6 731 aa16.29■□□□□ 0.2
SMTN-202ENST00000347557 LRWD1Q9UFC0 647 aa16.29■□□□□ 0.2
SMTN-202ENST00000347557 CAPN11Q9UMQ6 739 aa16.29■□□□□ 0.2
SMTN-202ENST00000347557 SPA17Q15506 151 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 NLRP3Q96P20 1036 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 TANGO6Q9C0B7 1094 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 SMARCAL1Q9NZC9 954 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 BIN2Q9UBW5 565 aaPredicted RBP16.28■□□□□ 0.2
SMTN-202ENST00000347557 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 CYTH3O43739 400 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 RNF40O75150 1001 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 EEF1GP26641 437 aaKnown RBP16.28■□□□□ 0.2
SMTN-202ENST00000347557 KIF5AQ12840 1032 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 TRAPPC11Q7Z392 1133 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 C2CD5Q86YS7 1000 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 COL4A1P02462 1669 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 KLRF2D3W0D1 207 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 KLRC4O43908 158 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 USP14P54578 494 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 FBXO33Q7Z6M2 555 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 AMOTL1Q8IY63 956 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 P2RX5Q93086 422 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 DUSP9Q99956 384 aaKnown RBP16.28■□□□□ 0.2
SMTN-202ENST00000347557 UBA5Q9GZZ9 404 aa16.28■□□□□ 0.2
SMTN-202ENST00000347557 PCP11498 1178 aaKnown RBP16.27■□□□□ 0.2
SMTN-202ENST00000347557 TTI2Q6NXR4 508 aa16.27■□□□□ 0.2
SMTN-202ENST00000347557 MLXIPQ9HAP2 919 aa16.27■□□□□ 0.2
SMTN-202ENST00000347557 PDE2AO00408 941 aaPredicted RBP16.27■□□□□ 0.19
SMTN-202ENST00000347557 SLC35G1Q2M3R5 365 aa16.27■□□□□ 0.19
SMTN-202ENST00000347557 DNAJC7Q99615 494 aa16.27■□□□□ 0.19
SMTN-202ENST00000347557 THAP9Q9H5L6 903 aa16.27■□□□□ 0.19
SMTN-202ENST00000347557 MAD2L2Q9UI95 211 aa16.27■□□□□ 0.19
SMTN-202ENST00000347557 TAF1P21675 1872 aa16.27■□□□□ 0.19
SMTN-202ENST00000347557 TIAM2Q8IVF5 1701 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 SMCO2A6NFE2 343 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 MYO1CO00159 1063 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 ZPR1O75312 459 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 SSBP05455 408 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMTN-202ENST00000347557 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
SMTN-202ENST00000347557 FECHP22830 423 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 SLC7A5Q01650 507 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 DNAJC21Q5F1R6 531 aaKnown RBP16.26■□□□□ 0.19
SMTN-202ENST00000347557 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 GIMAP8Q8ND71 665 aaPredicted RBP16.26■□□□□ 0.19
SMTN-202ENST00000347557 ZNF507Q8TCN5 953 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
SMTN-202ENST00000347557 AKR1B10O60218 316 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 FGRP09769 529 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 MYBL2P10244 700 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 GRIK5Q16478 980 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 EHD2Q9NZN4 543 aa16.26■□□□□ 0.19
SMTN-202ENST00000347557 PDS5AQ29RF7 1337 aaKnown RBP16.26■□□□□ 0.19
SMTN-202ENST00000347557 PSMD14O00487 310 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 MOCS3O95396 460 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 SRGNP10124 158 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms