RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MYLK4Q86YV6 388 aaPredicted RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 PLD3Q8IV08 490 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 MAP3K1Q13233 1512 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 XPO1O14980 1071 aaKnown RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 TPP2P29144 1249 aaPredicted RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 CTTNQ14247 550 aaKnown RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 ANKRD35Q8N283 1001 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 GPR101Q96P66 508 aaPredicted RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 ASCC2Q9H1I8 757 aaPredicted RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 RSPH10B2B2RC85 870 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 STRNO43815 780 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 RASSF9O75901 435 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 RSPH10BP0C881 870 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 KCNA3P22001 575 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 SERPINB3P29508 390 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 ADCY8P40145 1251 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 SLFN5Q08AF3 891 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 OLFML1Q6UWY5 402 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 PPP1R42Q7Z4L9 355 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 CNBD2Q96M20 576 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 CARD10Q9BWT7 1032 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 IL1RAPL1Q9NZN1 696 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 PDP2Q9P2J9 529 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 SPG7Q9UQ90 795 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 SCN10AQ9Y5Y9 1956 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 PSDA5PKW4 1024 aaPredicted RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 GOLGA8RI6L899 631 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 TRHP20396 242 aaPredicted RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 RBM5P52756 815 aaKnown RBP eCLIP6.7□□□□□ -1.34
VCAN-203ENST00000343200 CYTH1Q15438 398 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 EMBQ6PCB8 327 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 BZW1Q7L1Q6 419 aaKnown RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 FBXL13Q8NEE6 735 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 PSMB7Q99436 277 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 ALG1Q9BT22 464 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 UBE2OQ9C0C9 1292 aaKnown RBP6.7□□□□□ -1.34
VCAN-203ENST00000343200 FAM8A1Q9UBU6 413 aa6.7□□□□□ -1.34
VCAN-203ENST00000343200 LAMC1P11047 1609 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 PFDN6O15212 129 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 HNRNPRO43390 633 aaKnown RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 HOXA7P31268 230 aaPredicted RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 TUBA3CQ13748 450 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 STX19Q8N4C7 294 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 PPP1R13BQ96KQ4 1090 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 CATSPER2Q96P56 530 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 ADAM21Q9UKJ8 722 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 ZMYM3Q14202 1370 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 GTF3C1Q12789 2109 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 GSNP06396 782 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 HNRNPH2P55795 449 aaKnown RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 ADCY2Q08462 1091 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 KLHL12Q53G59 568 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 ESCO1Q5FWF5 840 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 GGT6Q6P531 493 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 HIC2Q96JB3 615 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 CLSTN2Q9H4D0 955 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 ZBTB43O43298 467 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 TNNC2P02585 160 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 TCP1P17987 556 aaKnown RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 SF3A3Q12874 501 aaKnown RBP eCLIP6.69□□□□□ -1.34
VCAN-203ENST00000343200 ARHGAP22Q7Z5H3 698 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 CDR2LQ86X02 465 aaPredicted RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 ASZ1Q8WWH4 475 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 POMGNT1Q8WZA1 660 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 LRRC59Q96AG4 307 aaKnown RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 UNC45AQ9H3U1 944 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 RAD21L1Q9H4I0 556 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 SMARCAD1Q9H4L7 1026 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 MINK1Q8N4C8 1332 aaPredicted RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 CDC42BPBQ9Y5S2 1711 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 ANKRD31Q8N7Z5 1873 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 GOLGA8CPA6NN73 597 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 GNA14O95837 355 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 INHBAP08476 426 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 ATF2P15336 505 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 RECQLP46063 649 aaPredicted RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 KIF9Q9HAQ2 790 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 AP4S1Q9Y587 144 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 GUCY1B2O75343 617 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 SLC9A1P19634 815 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 CLCN6P51797 869 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 MDM2Q00987 491 aaPredicted RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 PSME1Q06323 249 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 TBC1D8BQ0IIM8 1120 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 CADPS2Q86UW7 1296 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 CYTH2Q99418 400 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 PPP2R2CQ9Y2T4 447 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 PCF11O94913 1555 aaKnown RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 PCNX2A6NKB5 2137 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 MSH6P52701 1360 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 KDM2BQ8NHM5 1336 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 GARSP41250 739 aaKnown RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 GJA8P48165 433 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 IL1RL1Q01638 556 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 GUCY2DQ02846 1103 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 TMEM87AQ8NBN3 555 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 ATP8B4Q8TF62 1192 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 MTBPQ96DY7 904 aa6.69□□□□□ -1.34
VCAN-203ENST00000343200 NOC2LQ9Y3T9 749 aaKnown RBP6.69□□□□□ -1.34
VCAN-203ENST00000343200 IGHMBP2P38935 993 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms