RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CCPG1Q9ULG6 757 aa20.05■□□□□ 0.8
BRCC3-202ENST00000340647 CNPY2Q9Y2B0 182 aa20.05■□□□□ 0.8
BRCC3-202ENST00000340647 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.04■□□□□ 0.8
BRCC3-202ENST00000340647 KBTBD13C9JR72 458 aa20.04■□□□□ 0.8
BRCC3-202ENST00000340647 POTEB2H3BUK9 544 aa20.04■□□□□ 0.8
BRCC3-202ENST00000340647 SEC23AQ15436 765 aa20.04■□□□□ 0.8
BRCC3-202ENST00000340647 IMMTQ16891 758 aaKnown RBP20.04■□□□□ 0.8
BRCC3-202ENST00000340647 CCDC144BQ3MJ40 725 aa20.04■□□□□ 0.8
BRCC3-202ENST00000340647 ZSCAN10Q96SZ4 725 aaPredicted RBP20.04■□□□□ 0.8
BRCC3-202ENST00000340647 ABHD16BQ9H3Z7 469 aa20.04■□□□□ 0.8
BRCC3-202ENST00000340647 ZHX1Q9UKY1 873 aaPredicted RBP20.04■□□□□ 0.8
BRCC3-202ENST00000340647 RAD50Q92878 1312 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 BAZ2BQ9UIF8 2168 aaKnown RBP20.03■□□□□ 0.8
BRCC3-202ENST00000340647 DLL1O00548 723 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 SGSM2O43147 1006 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 DUSP11O75319 330 aaKnown RBP20.03■□□□□ 0.8
BRCC3-202ENST00000340647 MYCNP04198 464 aaPredicted RBP20.03■□□□□ 0.8
BRCC3-202ENST00000340647 CYP21A2P08686 494 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 TRIM60Q495X7 471 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 C1orf53Q5VUE5 145 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 SH3RF1Q7Z6J0 888 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 PNMA1Q8ND90 353 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 MORC4Q8TE76 937 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 UBA5Q9GZZ9 404 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 FAM184BQ9ULE4 1060 aa20.03■□□□□ 0.8
BRCC3-202ENST00000340647 TNKSO95271 1327 aa20.02■□□□□ 0.8
BRCC3-202ENST00000340647 A0A1W2PQ45 241 aaPredicted RBP20.02■□□□□ 0.8
BRCC3-202ENST00000340647 A0A1W2PQY0 241 aa20.02■□□□□ 0.8
BRCC3-202ENST00000340647 MDM2Q00987 491 aaPredicted RBP20.02■□□□□ 0.8
BRCC3-202ENST00000340647 BAATQ14032 418 aaPredicted RBP20.02■□□□□ 0.8
BRCC3-202ENST00000340647 COL9A3Q14050 684 aaPredicted RBP20.02■□□□□ 0.8
BRCC3-202ENST00000340647 TAPT1Q6NXT6 567 aa20.02■□□□□ 0.8
BRCC3-202ENST00000340647 STOX1Q6ZVD7 989 aa20.02■□□□□ 0.8
BRCC3-202ENST00000340647 UPF3AQ9H1J1 476 aaKnown RBP20.02■□□□□ 0.8
BRCC3-202ENST00000340647 SENP2Q9HC62 589 aa20.02■□□□□ 0.8
BRCC3-202ENST00000340647 PDGFCQ9NRA1 345 aa20.02■□□□□ 0.8
BRCC3-202ENST00000340647 CTNNA3Q9UI47 895 aa20.02■□□□□ 0.8
BRCC3-202ENST00000340647 ATP11BQ9Y2G3 1177 aa20.02■□□□□ 0.8
BRCC3-202ENST00000340647 ITGB8P26012 769 aa20.01■□□□□ 0.79
BRCC3-202ENST00000340647 NT5C2P49902 561 aa20.01■□□□□ 0.79
BRCC3-202ENST00000340647 NKX3-2P78367 333 aa20.01■□□□□ 0.79
BRCC3-202ENST00000340647 SLC35G1Q2M3R5 365 aa20.01■□□□□ 0.79
BRCC3-202ENST00000340647 GNEQ9Y223 722 aaKnown RBP20.01■□□□□ 0.79
BRCC3-202ENST00000340647 UNC80Q8N2C7 3258 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 TRIM43BA6NCK2 446 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 CST5P28325 142 aaPredicted RBP20■□□□□ 0.79
BRCC3-202ENST00000340647 ACLYP53396 1101 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 GJA9P57773 515 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 KCNA10Q16322 511 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 NSMFQ6X4W1 530 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 SLC30A10Q6XR72 485 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 RNF180Q86T96 592 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 IQCA1Q86XH1 822 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 STAG2Q8N3U4 1231 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 TRIM43Q96BQ3 446 aaPredicted RBP20■□□□□ 0.79
BRCC3-202ENST00000340647 TSEN34Q9BSV6 310 aaKnown RBP20■□□□□ 0.79
BRCC3-202ENST00000340647 PDLIM7Q9NR12 457 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 WDR19Q8NEZ3 1342 aa20■□□□□ 0.79
BRCC3-202ENST00000340647 TLE2Q04725 743 aa19.99■□□□□ 0.79
BRCC3-202ENST00000340647 GPATCH4Q5T3I0 446 aaKnown RBP19.99■□□□□ 0.79
BRCC3-202ENST00000340647 TBC1D5Q92609 795 aa19.99■□□□□ 0.79
BRCC3-202ENST00000340647 MAP4K1Q92918 833 aa19.99■□□□□ 0.79
BRCC3-202ENST00000340647 KRT23Q9C075 422 aa19.99■□□□□ 0.79
BRCC3-202ENST00000340647 ASB14A6NK59 587 aa19.98■□□□□ 0.79
BRCC3-202ENST00000340647 SMPD1P17405 629 aa19.98■□□□□ 0.79
BRCC3-202ENST00000340647 Q7L0L9 218 aa19.98■□□□□ 0.79
BRCC3-202ENST00000340647 FBXO16Q8IX29 292 aaPredicted RBP19.98■□□□□ 0.79
BRCC3-202ENST00000340647 ADGRF4Q8IZF3 695 aa19.98■□□□□ 0.79
BRCC3-202ENST00000340647 KAT14Q9H8E8 782 aa19.98■□□□□ 0.79
BRCC3-202ENST00000340647 CNNM2Q9H8M5 875 aa19.98■□□□□ 0.79
BRCC3-202ENST00000340647 KIAA1217Q5T5P2 1943 aa19.98■□□□□ 0.79
BRCC3-202ENST00000340647 ALDH5A1P51649 535 aaPredicted RBP19.97■□□□□ 0.79
BRCC3-202ENST00000340647 ANTXR2P58335 489 aa19.97■□□□□ 0.79
BRCC3-202ENST00000340647 LRIT3Q3SXY7 679 aa19.97■□□□□ 0.79
BRCC3-202ENST00000340647 CCDC178Q5BJE1 867 aa19.97■□□□□ 0.79
BRCC3-202ENST00000340647 GPR153Q6NV75 609 aa19.97■□□□□ 0.79
BRCC3-202ENST00000340647 EEPD1Q7L9B9 569 aa19.97■□□□□ 0.79
BRCC3-202ENST00000340647 TDHQ8IZJ6 230 aa19.97■□□□□ 0.79
BRCC3-202ENST00000340647 UBE2OQ9C0C9 1292 aaKnown RBP19.97■□□□□ 0.79
BRCC3-202ENST00000340647 JMJD4Q9H9V9 463 aa19.97■□□□□ 0.79
BRCC3-202ENST00000340647 E7EWF7 191 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 ASGR1P07306 291 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 C6orf222P0C671 652 aaPredicted RBP19.96■□□□□ 0.79
BRCC3-202ENST00000340647 CDK7P50613 346 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 RPS6P62753 249 aaKnown RBP19.96■□□□□ 0.79
BRCC3-202ENST00000340647 BEX3Q00994 111 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 TNFAIP2Q03169 654 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 CDC37Q16543 378 aaPredicted RBP19.96■□□□□ 0.79
BRCC3-202ENST00000340647 DEFB123Q8N688 67 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 RUFY2Q8WXA3 655 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 MTMR8Q96EF0 704 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 LSG1Q9H089 658 aaKnown RBP19.96■□□□□ 0.79
BRCC3-202ENST00000340647 COL20A1Q9P218 1284 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 MAD2L2Q9UI95 211 aa19.96■□□□□ 0.79
BRCC3-202ENST00000340647 CUL9Q8IWT3 2517 aa19.95■□□□□ 0.78
BRCC3-202ENST00000340647 MOXD2PA6NHM9 499 aa19.95■□□□□ 0.78
BRCC3-202ENST00000340647 OPLAHO14841 1288 aa19.95■□□□□ 0.78
BRCC3-202ENST00000340647 PPP1R11O60927 126 aaPredicted RBP19.95■□□□□ 0.78
BRCC3-202ENST00000340647 EDNRBP24530 442 aa19.95■□□□□ 0.78
BRCC3-202ENST00000340647 FAAP100Q0VG06 881 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms