RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CEP104O60308 925 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 SASH1O94885 1247 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 PDE8BO95263 885 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 TYW1BQ6NUM6 668 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 APOA5Q6Q788 366 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 RBM43Q6ZSC3 357 aaKnown RBP17.65■□□□□ 0.42
NPHP3-201ENST00000337331 RRAGAQ7L523 313 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 C2CD5Q86YS7 1000 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 PI4K2BQ8TCG2 481 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 MAST3O60307 1309 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 SPOPO43791 374 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 SLC1A4P43007 532 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 ADCY7P51828 1080 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 KLHL30Q0D2K2 578 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 TOB2Q14106 344 aaPredicted RBP17.65■□□□□ 0.42
NPHP3-201ENST00000337331 CALCRLQ16602 461 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 NBPF20Q3BBV1 942 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 ALS2CLQ60I27 953 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 CYB5D1Q6P9G0 228 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 KCNV2Q8TDN2 545 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 ZNF473Q8WTR7 871 aaKnown RBP17.65■□□□□ 0.42
NPHP3-201ENST00000337331 KAT2BQ92831 832 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 IFIH1Q9BYX4 1025 aaKnown RBP17.65■□□□□ 0.42
NPHP3-201ENST00000337331 CDHR2Q9BYE9 1310 aa17.64■□□□□ 0.42
NPHP3-201ENST00000337331 SESN3P58005 492 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 ZBTB16Q05516 673 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 ASIC2Q16515 512 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 CEP128Q6ZU80 1094 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 PANX2Q96RD6 677 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 EYA3Q99504 573 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 BATF3Q9NR55 127 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 GGA1Q9UJY5 639 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 PRDM15P57071 1507 aaPredicted RBP17.64■□□□□ 0.41
NPHP3-201ENST00000337331 DIAPH2O60879 1101 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 PDHA1P08559 390 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 MYBL1P10243 752 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 TRIM58Q8NG06 486 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 HVCN1Q96D96 273 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 SNUPNO95149 360 aaKnown RBP17.64■□□□□ 0.41
NPHP3-201ENST00000337331 CFAP221Q4G0U5 840 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 RBM26Q5T8P6 1007 aaKnown RBP17.64■□□□□ 0.41
NPHP3-201ENST00000337331 GRAMD1CQ8IYS0 662 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 KLHL29Q96CT2 875 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 ZSCAN10Q96SZ4 725 aaPredicted RBP17.64■□□□□ 0.41
NPHP3-201ENST00000337331 TRIM7Q9C029 511 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 NBPF3Q9H094 633 aa17.64■□□□□ 0.41
NPHP3-201ENST00000337331 KCNJ18B7U540 433 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 RPS6KA5O75582 802 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 KCNJ12Q14500 433 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 UBE3CQ15386 1083 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 MUM1Q2TAK8 710 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 VSIG1Q86XK7 387 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 TRIML1Q8N9V2 468 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 SMCO2A6NFE2 343 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 PPP1R37O75864 691 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 MMS19Q96T76 1030 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 BPIFA3Q9BQP9 254 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 GJB4Q9NTQ9 266 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 HECW2Q9P2P5 1572 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 TEX33O43247 280 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 IFNAR2P48551 515 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 PTGDRQ13258 359 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 INF2Q27J81 1249 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 PI16Q6UXB8 463 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 BLIDQ8IZY5 108 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 PPFIBP2Q8ND30 876 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 ATP7BP35670 1465 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 SMTNP53814 917 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 C6orf163Q5TEZ5 329 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 TBC1D22AQ8WUA7 517 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 ETAA1Q9NY74 926 aa17.63■□□□□ 0.41
NPHP3-201ENST00000337331 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 ABCA9Q8IUA7 1624 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
NPHP3-201ENST00000337331 LSP1P33241 339 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 PTPN12Q05209 780 aaKnown RBP17.62■□□□□ 0.41
NPHP3-201ENST00000337331 DPH6Q7L8W6 267 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 PNMA1Q8ND90 353 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 CDCA7Q9BWT1 371 aaPredicted RBP17.62■□□□□ 0.41
NPHP3-201ENST00000337331 NFU1Q9UMS0 254 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 ARAP3Q8WWN8 1544 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 SEL1L2Q5TEA6 688 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 SPATA1Q5VX52 437 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 TC2NQ8N9U0 490 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 FERMT1Q9BQL6 677 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 KRT14P02533 472 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 MORC3Q14149 939 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 KCNB1Q14721 858 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 SMYD4Q8IYR2 804 aaPredicted RBP17.62■□□□□ 0.41
NPHP3-201ENST00000337331 MSANTD4Q8NCY6 345 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 LZTS2Q9BRK4 669 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 ATG3Q9NT62 314 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
NPHP3-201ENST00000337331 GSCP56915 257 aaPredicted RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 BIRC3Q13489 604 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 MGARPQ8TDB4 240 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 EPN3Q9H201 632 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 GPR108Q9NPR9 543 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 POLR3EQ9NVU0 708 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 ROBO2Q9HCK4 1378 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms