RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 SGMS1Q86VZ5 419 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 ZNF507Q8TCN5 953 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 EDC3Q96F86 508 aaKnown RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 PAGE5Q96GU1 130 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 THAP9Q9H5L6 903 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 PDS5AQ29RF7 1337 aaKnown RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 TTC26A0AVF1 554 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 NUTM2BA6NNL0 878 aaPredicted RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 NUTM2EB1AL46 878 aaPredicted RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 PJA2O43164 708 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 WFS1O76024 890 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 ANP32DO95626 131 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 MMP1P03956 469 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 PTPN12Q05209 780 aaKnown RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 NEXNQ0ZGT2 675 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 CUL1Q13616 776 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 E2F5Q15329 346 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 CCDC57Q2TAC2 916 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 MTA3Q9BTC8 594 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 NDST4Q9H3R1 872 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 DDX21Q9NR30 783 aaKnown RBP eCLIP9.29□□□□□ -0.92
SKA2-201ENST00000330137 ANKIB1Q9P2G1 1089 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 STXBP3O00186 592 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 TRIM37O94972 964 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 VIMP08670 466 aaKnown RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 SEC24CP53992 1094 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 PPP2R2AP63151 447 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 UBXN1Q04323 297 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 SPA17Q15506 151 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 NTRK3Q16288 839 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 MEX3CQ5U5Q3 659 aaKnown RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 SH2D3CQ8N5H7 860 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 GBP7Q8N8V2 638 aaPredicted RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 CCDC63Q8NA47 563 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 TTYH3Q9C0H2 523 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 SH2D4AQ9H788 454 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 SLC5A4Q9NY91 659 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 TRIM10Q9UDY6 481 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 FLOT1O75955 427 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 FMNL1O95466 1100 aaPredicted RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 PAPOLAP51003 745 aaKnown RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 ZNF131P52739 623 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 ANTXR2P58335 489 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 TFCP2Q12800 502 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 LBRQ14739 615 aaKnown RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 ZNF827Q17R98 1081 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 ZNF658Q5TYW1 1059 aaPredicted RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 MTHFD1LQ6UB35 978 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 KLHL23Q8NBE8 558 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 CCDC197Q8NCU1 140 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 SPDYE1Q8NFV5 336 aaPredicted RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 RABEP2Q9H5N1 569 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 NHEJ1Q9H9Q4 299 aaPredicted RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 KCNMB3Q9NPA1 279 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 RNF225M0QZC1 329 aaPredicted RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 ZNF185O15231 689 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 MYL1P05976 194 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 RPSAP08865 295 aaKnown RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 SETSIPP0DME0 302 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 CNGA1P29973 690 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 LIFRP42702 1097 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 TOB1P50616 345 aaPredicted RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 SSRP1Q08945 709 aaKnown RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 BYSLQ13895 437 aaKnown RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 SGSM1Q2NKQ1 1148 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 CWF19L2Q2TBE0 894 aaKnown RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 KCTD16Q68DU8 428 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 LMOD2Q6P5Q4 547 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 DDX46Q7L014 1031 aaKnown RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 MAATS1Q7Z4T9 603 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
SKA2-201ENST00000330137 HDAC7Q8WUI4 952 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 TBC1D31Q96DN5 1066 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 PCDHGC5Q9Y5F6 944 aa9.28□□□□□ -0.92
SKA2-201ENST00000330137 EME2A4GXA9 379 aaPredicted RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 PPP1R12BO60237 982 aaPredicted RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 COQ9O75208 318 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 NPTXRO95502 500 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 SRGNP10124 158 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 IFNAR1P17181 557 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 PPP1R2P41236 205 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 MYO1EQ12965 1108 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 GCKRQ14397 625 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 AKAP4Q5JQC9 854 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 APBB1IPQ7Z5R6 666 aaPredicted RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 CROCCP2Q86T23 111 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 GALNT15Q8N3T1 639 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 BICD1Q96G01 975 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 NEUROD6Q96NK8 337 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 DBNDD2Q9BQY9 259 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 ISCUQ9H1K1 167 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 SOS2Q07890 1332 aaPredicted RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 RGPD8O14715 1765 aaPredicted RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 A0A0G2JS52 829 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 NEURL1BA8MQ27 555 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 BHMG1C9JSJ3 638 aaPredicted RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 ZNF213O14771 459 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 MYBP10242 640 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 CCT6AP40227 531 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms