RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ZNF263O14978 683 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 SPA17Q15506 151 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 SKIDA1Q1XH10 827 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 CAPS2Q9BXY5 557 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 CCSER1Q9C0I3 900 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 ZNF804BA4D1E1 1349 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 FAM205AQ6ZU69 1335 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 PP2D1A8MPX8 630 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 EBAG9O00559 213 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 ORC4O43929 436 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 CCT5P48643 541 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 CHRNDQ07001 517 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 CCDC152Q4G0S7 254 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 FAM114A1Q8IWE2 563 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 P2RX5Q93086 422 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 CCDC42Q96M95 316 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 ERGIC2Q96RQ1 377 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 LRRC1Q9BTT6 524 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 LRWD1Q9UFC0 647 aa18.66■□□□□ 0.58
SSH1-201ENST00000326470 AHDC1Q5TGY3 1603 aaPredicted RBP18.65■□□□□ 0.58
SSH1-201ENST00000326470 BICDL2A1A5D9 508 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 NMT2O60551 498 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 USO1O60763 962 aaKnown RBP18.65■□□□□ 0.58
SSH1-201ENST00000326470 TACC1O75410 805 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 CCNE1P24864 410 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 UBA7P41226 1012 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 ZSCAN29Q8IWY8 852 aaPredicted RBP18.65■□□□□ 0.58
SSH1-201ENST00000326470 SPATA4Q8NEY3 305 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 HDAC7Q8WUI4 952 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 CNOT6LQ96LI5 555 aaKnown RBP18.65■□□□□ 0.58
SSH1-201ENST00000326470 PCMTD1Q96MG8 357 aaPredicted RBP18.65■□□□□ 0.58
SSH1-201ENST00000326470 YY1AP1Q9H869 796 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 DMGDHQ9UI17 866 aaKnown RBP18.65■□□□□ 0.58
SSH1-201ENST00000326470 PCDHA4Q9UN74 947 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 BAZ2BQ9UIF8 2168 aaKnown RBP18.65■□□□□ 0.58
SSH1-201ENST00000326470 USP17L12C9JPN9 530 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 USP17L21D6R901 530 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 EIF3HO15372 352 aaKnown RBP eCLIP18.65■□□□□ 0.58
SSH1-201ENST00000326470 EZH2Q15910 746 aaKnown RBP18.65■□□□□ 0.58
SSH1-201ENST00000326470 MIIPQ5JXC2 388 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 IQCDQ96DY2 449 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 SH3GLB2Q9NR46 395 aa18.65■□□□□ 0.58
SSH1-201ENST00000326470 CICQ96RK0 1608 aaPredicted RBP18.65■□□□□ 0.58
SSH1-201ENST00000326470 OPA1O60313 960 aa18.64■□□□□ 0.58
SSH1-201ENST00000326470 GUCY2CP25092 1073 aa18.64■□□□□ 0.58
SSH1-201ENST00000326470 HNRNPH3P31942 346 aaKnown RBP18.64■□□□□ 0.58
SSH1-201ENST00000326470 CCDC96Q2M329 555 aa18.64■□□□□ 0.58
SSH1-201ENST00000326470 MICALL1Q8N3F8 863 aa18.64■□□□□ 0.58
SSH1-201ENST00000326470 RRP36Q96EU6 259 aaKnown RBP18.64■□□□□ 0.58
SSH1-201ENST00000326470 SH2D4AQ9H788 454 aa18.64■□□□□ 0.58
SSH1-201ENST00000326470 CAPN6Q9Y6Q1 641 aa18.64■□□□□ 0.58
SSH1-201ENST00000326470 GRIN2DO15399 1336 aa18.64■□□□□ 0.58
SSH1-201ENST00000326470 ROBO1Q9Y6N7 1651 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 EPB41P11171 864 aaKnown RBP18.64■□□□□ 0.57
SSH1-201ENST00000326470 KIF5BP33176 963 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 MTIF2P46199 727 aaKnown RBP18.64■□□□□ 0.57
SSH1-201ENST00000326470 SF3B2Q13435 895 aaKnown RBP18.64■□□□□ 0.57
SSH1-201ENST00000326470 ANKRD40Q6AI12 368 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
SSH1-201ENST00000326470 KRT26Q7Z3Y9 468 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 SUGP1Q8IWZ8 645 aaKnown RBP18.64■□□□□ 0.57
SSH1-201ENST00000326470 BCAS4Q8TDM0 211 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 SMCR8Q8TEV9 937 aaPredicted RBP18.64■□□□□ 0.57
SSH1-201ENST00000326470 HINFPQ9BQA5 517 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 NOC4LQ9BVI4 516 aaKnown RBP18.64■□□□□ 0.57
SSH1-201ENST00000326470 TMEM60Q9H2L4 133 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 BTG4Q9NY30 223 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 PLAGL2Q9UPG8 496 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 FAM169AQ9Y6X4 670 aa18.64■□□□□ 0.57
SSH1-201ENST00000326470 BAZ2AQ9UIF9 1905 aaKnown RBP18.64■□□□□ 0.57
SSH1-201ENST00000326470 EMBQ6PCB8 327 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 LRRC15Q8TF66 581 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 EEF2KMTQ96G04 330 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 IFIH1Q9BYX4 1025 aaKnown RBP18.63■□□□□ 0.57
SSH1-201ENST00000326470 CUEDC2Q9H467 287 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 MAGEF1Q9HAY2 307 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 PCDHA13Q9Y5I0 950 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 CACNA1SQ13698 1873 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 M0R2N6 131 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 TCP1P17987 556 aaKnown RBP18.63■□□□□ 0.57
SSH1-201ENST00000326470 EPHB4P54760 987 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 FAM47AQ5JRC9 791 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 ALS2CLQ60I27 953 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 MMS22LQ6ZRQ5 1243 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 ANKRD18AQ8IVF6 992 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 RASGRP4Q8TDF6 673 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 OSBPL9Q96SU4 736 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 PLIN2Q99541 437 aa18.63■□□□□ 0.57
SSH1-201ENST00000326470 COL14A1Q05707 1796 aaKnown RBP18.63■□□□□ 0.57
SSH1-201ENST00000326470 SHTN1A0MZ66 631 aa18.62■□□□□ 0.57
SSH1-201ENST00000326470 ERLIN2O94905 339 aa18.62■□□□□ 0.57
SSH1-201ENST00000326470 PLEKP08567 350 aaPredicted RBP18.62■□□□□ 0.57
SSH1-201ENST00000326470 PPP1R2P41236 205 aa18.62■□□□□ 0.57
SSH1-201ENST00000326470 GNGT1P63211 74 aa18.62■□□□□ 0.57
SSH1-201ENST00000326470 FKBP15Q5T1M5 1219 aa18.62■□□□□ 0.57
SSH1-201ENST00000326470 CCDC47Q96A33 483 aaKnown RBP18.62■□□□□ 0.57
SSH1-201ENST00000326470 EHD4Q9H223 541 aa18.62■□□□□ 0.57
SSH1-201ENST00000326470 BCL9O00512 1426 aa18.62■□□□□ 0.57
SSH1-201ENST00000326470 RREB1Q92766 1687 aa18.62■□□□□ 0.57
SSH1-201ENST00000326470 CCDC194A0A1B0GVG4 234 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms