RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 FAM178BQ8IXR5 827 aa18.65■□□□□ 0.58
LMNB2-201ENST00000325327 PAK1Q13153 545 aa18.65■□□□□ 0.58
LMNB2-201ENST00000325327 TAB2Q9NYJ8 693 aa18.65■□□□□ 0.58
LMNB2-201ENST00000325327 NDUFB10O96000 172 aa18.64■□□□□ 0.58
LMNB2-201ENST00000325327 SKILP12757 684 aa18.64■□□□□ 0.58
LMNB2-201ENST00000325327 KRT5P13647 590 aa18.64■□□□□ 0.58
LMNB2-201ENST00000325327 TMEM260Q9NX78 707 aa18.64■□□□□ 0.58
LMNB2-201ENST00000325327 SERPINA10Q9UK55 444 aa18.64■□□□□ 0.58
LMNB2-201ENST00000325327 HSP90B2PQ58FF3 399 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 MTMR4Q9NYA4 1195 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 GPR75-ASB3A0A0A6YYF3 556 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 TRPC3Q13507 836 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 GRAMD1CQ8IYS0 662 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 AKT1S1Q96B36 256 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 MAP7D2Q96T17 732 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 STAT3P40763 770 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 TAF12Q16514 161 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 ADGRF4Q8IZF3 695 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 OXER1Q8TDS5 423 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 GJA10Q969M2 543 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 TRERF1Q96PN7 1200 aa18.64■□□□□ 0.57
LMNB2-201ENST00000325327 LARSQ9P2J5 1176 aaKnown RBP18.64■□□□□ 0.57
LMNB2-201ENST00000325327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.64■□□□□ 0.578e-7■■□□□ 11.8
LMNB2-201ENST00000325327 CCDC127Q96BQ5 260 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 CCDC42Q96M95 316 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 APOL6Q9BWW8 343 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 SENP2Q9HC62 589 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.57
LMNB2-201ENST00000325327 TNNI1P19237 187 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 SPOUT1Q5T280 376 aaKnown RBP18.63■□□□□ 0.57
LMNB2-201ENST00000325327 MCTP2Q6DN12 878 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 AGBL3Q8NEM8 1001 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 PDGFDQ9GZP0 370 aaPredicted RBP18.63■□□□□ 0.57
LMNB2-201ENST00000325327 GNG11P61952 73 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 CUL4AQ13619 759 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 TAF1CQ15572 869 aaPredicted RBP18.63■□□□□ 0.57
LMNB2-201ENST00000325327 TAF3Q5VWG9 929 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 RABGAP1Q9Y3P9 1069 aa18.63■□□□□ 0.57
LMNB2-201ENST00000325327 ENTPD3O75355 529 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 LRMPQ12912 555 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 SLC39A14Q15043 492 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 ARHGEF6Q15052 776 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 ODR4Q5SWX8 454 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 DCAF4Q8WV16 495 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
LMNB2-201ENST00000325327 LUC7L2Q9Y383 392 aaKnown RBP18.62■□□□□ 0.57
LMNB2-201ENST00000325327 SYNRGQ9UMZ2 1314 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 MTERF2Q49AM1 385 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 CEP170P1Q96L14 293 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 SRRTQ9BXP5 876 aaKnown RBP18.62■□□□□ 0.57
LMNB2-201ENST00000325327 JADE2Q9NQC1 790 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 INO80B-WBP1J3KQ70 363 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 K7ENM7 598 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 UVSSAQ2YD98 709 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 PDXDC2PQ6P474 469 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 NELFBQ8WX92 580 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 GTPBP4Q9BZE4 634 aaKnown RBP18.62■□□□□ 0.57
LMNB2-201ENST00000325327 INO80BQ9C086 356 aaPredicted RBP18.62■□□□□ 0.57
LMNB2-201ENST00000325327 MYO6Q9UM54 1294 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 EXOC7Q9UPT5 735 aa18.62■□□□□ 0.57
LMNB2-201ENST00000325327 CCDC172P0C7W6 258 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 RASA1P20936 1047 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.61■□□□□ 0.57
LMNB2-201ENST00000325327 FGFR2P21802 821 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 NRBP2Q9NSY0 501 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 FZD1Q9UP38 647 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 KDM3AQ9Y4C1 1321 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 TMEM110-MUSTN1A8MSY1 372 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 CMA1P23946 247 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 WDR44Q5JSH3 913 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 NBPF12Q5TAG4 269 aaPredicted RBP18.61■□□□□ 0.57
LMNB2-201ENST00000325327 SLC7A3Q8WY07 619 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 EPSTI1Q96J88 318 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 RBSNQ9H1K0 784 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 ANKFY1Q9P2R3 1169 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 PCDHA6Q9UN73 950 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 AKT3Q9Y243 479 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 PCDHA8Q9Y5H6 950 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 ANKRD62A6NC57 917 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 ORC4O43929 436 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 EPHX2P34913 555 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 MLKLQ8NB16 471 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
LMNB2-201ENST00000325327 INPP5BP32019 993 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 GUCY1A2P33402 732 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 LRRC41Q15345 812 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 FAM193AP78312 1265 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 CTTNQ14247 550 aaKnown RBP18.6■□□□□ 0.57
LMNB2-201ENST00000325327 SMYD4Q8IYR2 804 aaPredicted RBP18.6■□□□□ 0.57
LMNB2-201ENST00000325327 ZNF280CQ8ND82 737 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 FAM49AQ9H0Q0 323 aaPredicted RBP18.6■□□□□ 0.57
LMNB2-201ENST00000325327 PCDHA5Q9Y5H7 936 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 ADGRA1Q86SQ6 560 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 ATP6V0A1Q93050 837 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 ZNF512BQ96KM6 892 aaPredicted RBP18.6■□□□□ 0.57
LMNB2-201ENST00000325327 NBPF3Q9H094 633 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 KIAA1468Q9P260 1216 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 FEM1BQ9UK73 627 aa18.6■□□□□ 0.57
LMNB2-201ENST00000325327 RPS12P25398 132 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms