RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 NRDCO43847 1150 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 GDF11O95390 407 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 RPN1P04843 607 aaKnown RBP8.55□□□□□ -1.04
IFT88-201ENST00000319980 TXKP42681 527 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 GOLGA8FQ08AF8 430 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 GOLGA8DPQ0D2H9 430 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 SEPT2Q15019 361 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 CT47A1Q5JQC4 288 aaPredicted RBP8.55□□□□□ -1.04
IFT88-201ENST00000319980 CC2D2BQ6DHV5 1058 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 POTEDQ86YR6 584 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 CCSER1Q9C0I3 900 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 UTRNP46939 3433 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 ZBTB5O15062 677 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 TNNI2P48788 182 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 UBE2SQ16763 222 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 SUPT20HQ8NEM7 779 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 MYRIPQ8NFW9 859 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 ZNF592Q92610 1267 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 CTNND2Q9UQB3 1225 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 SLX4Q8IY92 1834 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 RAD17O75943 681 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 ICA1Q05084 483 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 PPP4R3BQ5MIZ7 849 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 CABP7Q86V35 215 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 CREBRFQ8IUR6 639 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 CCAR2Q8N163 923 aaKnown RBP8.54□□□□□ -1.04
IFT88-201ENST00000319980 TTLL6Q8N841 843 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 AK8Q96MA6 479 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 RMND1Q9NWS8 449 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 GDAQ9Y2T3 454 aa8.54□□□□□ -1.04
IFT88-201ENST00000319980 TDP2O95551 362 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 PLCG1P19174 1290 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 DHX8Q14562 1220 aaKnown RBP8.53□□□□□ -1.04
IFT88-201ENST00000319980 PTPN14Q15678 1187 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 ABCB5Q2M3G0 1257 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 ZNF658Q5TYW1 1059 aaPredicted RBP8.53□□□□□ -1.04
IFT88-201ENST00000319980 E4F1Q66K89 784 aaPredicted RBP8.53□□□□□ -1.04
IFT88-201ENST00000319980 SLFN13Q68D06 897 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 SPECC1LQ69YQ0 1117 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 SIAH1Q8IUQ4 282 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 LRRC15Q8TF66 581 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 CSRNP1Q96S65 589 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 PSTPIP2Q9H939 334 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 TCP10L2B9ZVM9 353 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 F5H6K3 240 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 SLC37A4O43826 429 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 PRCPP42785 496 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 MRPL12P52815 198 aaKnown RBP8.53□□□□□ -1.04
IFT88-201ENST00000319980 KLRC3Q07444 240 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 NR1I3Q14994 352 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 CALCRLQ16602 461 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 TMEM179Q6ZVK1 233 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 LARGE2Q8N3Y3 721 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 TSC1Q92574 1164 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 CUL5Q93034 780 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 MKL1Q969V6 931 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 RIC8AQ9NPQ8 531 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 ZNF277Q9NRM2 450 aaPredicted RBP8.53□□□□□ -1.04
IFT88-201ENST00000319980 KBTBD4Q9NVX7 518 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 NYAP2Q9P242 653 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 ADAMTSL1Q8N6G6 1762 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 ARFGEF1Q9Y6D6 1849 aa8.53□□□□□ -1.04
IFT88-201ENST00000319980 CLRN2A0PK11 232 aa8.52□□□□□ -1.04
IFT88-201ENST00000319980 RIOK3O14730 519 aaKnown RBP8.52□□□□□ -1.04
IFT88-201ENST00000319980 TEX33O43247 280 aa8.52□□□□□ -1.04
IFT88-201ENST00000319980 EDIL3O43854 480 aa8.52□□□□□ -1.04
IFT88-201ENST00000319980 GH2P01242 217 aa8.52□□□□□ -1.04
IFT88-201ENST00000319980 RBM10P98175 930 aaKnown RBP8.52□□□□□ -1.04
IFT88-201ENST00000319980 IKQ13123 557 aaPredicted RBP8.52□□□□□ -1.04
IFT88-201ENST00000319980 PAK1Q13153 545 aa8.52□□□□□ -1.04
IFT88-201ENST00000319980 NUP88Q99567 741 aaPredicted RBP8.52□□□□□ -1.04
IFT88-201ENST00000319980 ZBTB12Q9Y330 459 aaPredicted RBP8.52□□□□□ -1.04
IFT88-201ENST00000319980 PCDHA1Q9Y5I3 950 aa8.52□□□□□ -1.04
IFT88-201ENST00000319980 A0A1B0GTH6 734 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L15C9J2P7 530 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L13C9JLJ4 530 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L11C9JVI0 530 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L18D6R9N7 530 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L22D6RA61 530 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L17D6RBQ6 530 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L19D6RCP7 530 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L20D6RJB6 530 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 DYNC1I1O14576 645 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 ADKP55263 362 aaKnown RBP8.52□□□□□ -1.05
IFT88-201ENST00000319980 JAG1P78504 1218 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L24Q0WX57 530 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 QRICH1Q2TAL8 776 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 KMT5BQ4FZB7 885 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 CCDC93Q567U6 631 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 CDKAL1Q5VV42 579 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 CEP135Q66GS9 1140 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 USP17L6PQ6QN14 398 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 APTXQ7Z2E3 356 aaKnown RBP8.52□□□□□ -1.05
IFT88-201ENST00000319980 OGFOD1Q8N543 542 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 IGSF22Q8N9C0 903 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 NELFBQ8WX92 580 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 MTMR9Q96QG7 549 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 SLC24A3Q9HC58 644 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 LRWD1Q9UFC0 647 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms