RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 PDXDC2PQ6P474 469 aa18■□□□□ 0.47
SHISA2-201ENST00000319420 DISC1Q9NRI5 854 aa18■□□□□ 0.47
SHISA2-201ENST00000319420 KCNA3P22001 575 aa18■□□□□ 0.47
SHISA2-201ENST00000319420 LONP1P36776 959 aaKnown RBP18■□□□□ 0.47
SHISA2-201ENST00000319420 QRICH1Q2TAL8 776 aa18■□□□□ 0.47
SHISA2-201ENST00000319420 SIAH1Q8IUQ4 282 aa18■□□□□ 0.47
SHISA2-201ENST00000319420 KANSL2Q9H9L4 492 aa18■□□□□ 0.47
SHISA2-201ENST00000319420 PNMA6FA0A0J9YX94 578 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 TNNT1P13805 278 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 PLCG1P19174 1290 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 SFPQP23246 707 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHISA2-201ENST00000319420 NT5DC1Q5TFE4 455 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 RSBN1LQ6PCB5 846 aaPredicted RBP17.99■□□□□ 0.47
SHISA2-201ENST00000319420 CPLX3Q8WVH0 158 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 HPS3Q969F9 1004 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 IDI2Q9BXS1 227 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 PSTPIP2Q9H939 334 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 NRXN2Q9P2S2 1712 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 PES1O00541 588 aaKnown RBP17.99■□□□□ 0.47
SHISA2-201ENST00000319420 SNHG28P0DPA3 235 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 CCT6AP40227 531 aaKnown RBP17.99■□□□□ 0.47
SHISA2-201ENST00000319420 ARL6IP4Q66PJ3 421 aaKnown RBP17.99■□□□□ 0.47
SHISA2-201ENST00000319420 GALNT17Q6IS24 598 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 CABP7Q86V35 215 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 DAGLBQ8NCG7 672 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 SUPT20HQ8NEM7 779 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 CCDC17Q96LX7 622 aa17.99■□□□□ 0.47
SHISA2-201ENST00000319420 A0A1W2PRG0 241 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 ZBTB5O15062 677 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 CALCRLQ16602 461 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 NAALADL2Q58DX5 795 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 ACER1Q8TDN7 264 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 ZFP91Q96JP5 570 aaPredicted RBP17.98■□□□□ 0.47
SHISA2-201ENST00000319420 ARID3AQ99856 593 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 INTS13Q9NVM9 706 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 SYNRGQ9UMZ2 1314 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 DYNC1I1O14576 645 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 CDC37Q16543 378 aaPredicted RBP17.98■□□□□ 0.47
SHISA2-201ENST00000319420 NBPF9Q3BBW0 867 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 SH3RF1Q7Z6J0 888 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 ELOA2Q8IYF1 753 aaPredicted RBP17.98■□□□□ 0.47
SHISA2-201ENST00000319420 DACH1Q9UI36 760 aa17.98■□□□□ 0.47
SHISA2-201ENST00000319420 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 NDUFB10O96000 172 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 GPATCH4Q5T3I0 446 aaKnown RBP17.97■□□□□ 0.47
SHISA2-201ENST00000319420 TRIM49BA6NDI0 452 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 RPN1P04843 607 aaKnown RBP17.97■□□□□ 0.47
SHISA2-201ENST00000319420 HOXA13P31271 388 aaPredicted RBP17.97■□□□□ 0.47
SHISA2-201ENST00000319420 NOVP48745 357 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 NT5C2P49902 561 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 ADKP55263 362 aaKnown RBP17.97■□□□□ 0.47
SHISA2-201ENST00000319420 NIM1KQ8IY84 436 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 SPATA20Q8TB22 786 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 ERCC3P19447 782 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 RTKN2Q8IZC4 609 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 EHD4Q9H223 541 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 IMPACTQ9P2X3 320 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 BCS1LQ9Y276 419 aa17.97■□□□□ 0.47
SHISA2-201ENST00000319420 TEX33O43247 280 aa17.96■□□□□ 0.47
SHISA2-201ENST00000319420 EGFRP00533 1210 aa17.96■□□□□ 0.47
SHISA2-201ENST00000319420 SSBP05455 408 aaKnown RBP eCLIP17.96■□□□□ 0.47
SHISA2-201ENST00000319420 CUL5Q93034 780 aa17.96■□□□□ 0.47
SHISA2-201ENST00000319420 GSDMAQ96QA5 445 aa17.96■□□□□ 0.47
SHISA2-201ENST00000319420 ZNF70Q9UC06 446 aaPredicted RBP17.96■□□□□ 0.47
SHISA2-201ENST00000319420 TNS1Q9HBL0 1735 aaKnown RBP17.96■□□□□ 0.47
SHISA2-201ENST00000319420 PLIN4Q96Q06 1357 aa17.96■□□□□ 0.47
SHISA2-201ENST00000319420 GSDMDP57764 484 aa17.96■□□□□ 0.47
SHISA2-201ENST00000319420 TMEM179Q6ZVK1 233 aa17.96■□□□□ 0.47
SHISA2-201ENST00000319420 DYMQ7RTS9 669 aa17.96■□□□□ 0.47
SHISA2-201ENST00000319420 PPP1R3GB7ZBB8 358 aa17.95■□□□□ 0.46
SHISA2-201ENST00000319420 CXCL9Q07325 125 aa17.95■□□□□ 0.46
SHISA2-201ENST00000319420 NUDT12Q9BQG2 462 aa17.95■□□□□ 0.46
SHISA2-201ENST00000319420 LRWD1Q9UFC0 647 aa17.95■□□□□ 0.46
SHISA2-201ENST00000319420 HDAC9Q9UKV0 1011 aa17.95■□□□□ 0.46
SHISA2-201ENST00000319420 GTPBP6O43824 516 aaPredicted RBP17.95■□□□□ 0.46
SHISA2-201ENST00000319420 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
SHISA2-201ENST00000319420 E4F1Q66K89 784 aaPredicted RBP17.95■□□□□ 0.46
SHISA2-201ENST00000319420 SLC30A10Q6XR72 485 aa17.95■□□□□ 0.46
SHISA2-201ENST00000319420 CCAR2Q8N163 923 aaKnown RBP17.95■□□□□ 0.46
SHISA2-201ENST00000319420 ENOX1Q8TC92 643 aaKnown RBP17.95■□□□□ 0.46
SHISA2-201ENST00000319420 GLIS2Q9BZE0 524 aaPredicted RBP17.95■□□□□ 0.46
SHISA2-201ENST00000319420 PCNTO95613 3336 aa17.95■□□□□ 0.46
SHISA2-201ENST00000319420 PRCPP42785 496 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 ASIC1P78348 528 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 RAD51AP2Q09MP3 1159 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 CCDC174Q6PII3 467 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 FCHSD1Q86WN1 690 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 TRIML1Q8N9V2 468 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 CDK5RAP3Q96JB5 506 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 VPS16Q9H269 839 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 GJA3Q9Y6H8 435 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 EDIL3O43854 480 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 MRPL12P52815 198 aaKnown RBP17.94■□□□□ 0.46
SHISA2-201ENST00000319420 KIAA1755Q5JYT7 1200 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 FAM177A1Q8N128 213 aaPredicted RBP17.94■□□□□ 0.46
SHISA2-201ENST00000319420 ZNF710Q8N1W2 664 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 NELFBQ8WX92 580 aa17.94■□□□□ 0.46
SHISA2-201ENST00000319420 DDX25Q9UHL0 483 aaKnown RBP17.94■□□□□ 0.46
SHISA2-201ENST00000319420 CBFA2T2O43439 604 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms