RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 A0A0D9SFI3 127 aa20.65■□□□□ 0.9
EXOSC4-201ENST00000316052 PTGS1P23219 599 aa20.65■□□□□ 0.9
EXOSC4-201ENST00000316052 NKX3-2P78367 333 aa20.65■□□□□ 0.9
EXOSC4-201ENST00000316052 BEX3Q00994 111 aa20.65■□□□□ 0.9
EXOSC4-201ENST00000316052 TNFAIP2Q03169 654 aa20.65■□□□□ 0.9
EXOSC4-201ENST00000316052 PURBQ96QR8 312 aaKnown RBP20.65■□□□□ 0.9
EXOSC4-201ENST00000316052 CHD9Q3L8U1 2897 aa20.65■□□□□ 0.9
EXOSC4-201ENST00000316052 ASB14A6NK59 587 aa20.64■□□□□ 0.89
EXOSC4-201ENST00000316052 ARVCFO00192 962 aa20.64■□□□□ 0.89
EXOSC4-201ENST00000316052 MCMDC2Q4G0Z9 681 aa20.64■□□□□ 0.89
EXOSC4-201ENST00000316052 PDGFCQ9NRA1 345 aa20.64■□□□□ 0.89
EXOSC4-201ENST00000316052 CYP39A1Q9NYL5 469 aa20.64■□□□□ 0.89
EXOSC4-201ENST00000316052 GNEQ9Y223 722 aaKnown RBP20.64■□□□□ 0.89
EXOSC4-201ENST00000316052 LCTP09848 1927 aa20.64■□□□□ 0.89
EXOSC4-201ENST00000316052 A0A0U1RQG5 324 aaPredicted RBP20.63■□□□□ 0.89
EXOSC4-201ENST00000316052 SLC16A2P36021 539 aa20.63■□□□□ 0.89
EXOSC4-201ENST00000316052 TMEM63BQ5T3F8 832 aa20.63■□□□□ 0.89
EXOSC4-201ENST00000316052 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
EXOSC4-201ENST00000316052 C16orf59Q7L2K0 433 aa20.63■□□□□ 0.89
EXOSC4-201ENST00000316052 ZNF589Q86UQ0 364 aaPredicted RBP20.63■□□□□ 0.89
EXOSC4-201ENST00000316052 DCAF4Q8WV16 495 aa20.63■□□□□ 0.89
EXOSC4-201ENST00000316052 CCPG1Q9ULG6 757 aa20.63■□□□□ 0.89
EXOSC4-201ENST00000316052 MROH7Q68CQ1 1323 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 HSPD1P10809 573 aaKnown RBP20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 SMPD1P17405 629 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 NMIQ13287 307 aaPredicted RBP20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 CCDC96Q2M329 555 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 RRP12Q5JTH9 1297 aaKnown RBP20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 MFSD5Q6N075 450 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 TAPT1Q6NXT6 567 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 BTNL9Q6UXG8 535 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 FAM126BQ8IXS8 530 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 MYLIPQ8WY64 445 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 TMEM47Q9BQJ4 181 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 RANBP17Q9H2T7 1088 aaKnown RBP20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 TOMM22Q9NS69 142 aa20.62■□□□□ 0.89
EXOSC4-201ENST00000316052 ICAM1P05362 532 aa20.61■□□□□ 0.89
EXOSC4-201ENST00000316052 CXCL17Q6UXB2 119 aa20.61■□□□□ 0.89
EXOSC4-201ENST00000316052 NSMFQ6X4W1 530 aa20.61■□□□□ 0.89
EXOSC4-201ENST00000316052 EEPD1Q7L9B9 569 aa20.61■□□□□ 0.89
EXOSC4-201ENST00000316052 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.61■□□□□ 0.895e-8■■□□□ 12.8
EXOSC4-201ENST00000316052 LNPKQ9C0E8 428 aa20.61■□□□□ 0.89
EXOSC4-201ENST00000316052 TCP11L1Q9NUJ3 509 aa20.61■□□□□ 0.89
EXOSC4-201ENST00000316052 FRMPD2Q68DX3 1309 aaPredicted RBP20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 DYNC1LI2O43237 492 aaPredicted RBP20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 CD4P01730 458 aa20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 TOP1P11387 765 aaKnown RBP20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 HAND2P61296 217 aa20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 FSCN1Q16658 493 aaKnown RBP20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 SYDE2Q5VT97 1194 aa20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 TLK2Q86UE8 772 aa20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 FBXO16Q8IX29 292 aaPredicted RBP20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 SLC43A3Q8NBI5 491 aa20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 GPCPD1Q9NPB8 672 aa20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 LRRC37A2A6NM11 1700 aa20.6■□□□□ 0.89
EXOSC4-201ENST00000316052 SPTBN5Q9NRC6 3674 aaKnown RBP20.59■□□□□ 0.89
EXOSC4-201ENST00000316052 GRIN2DO15399 1336 aa20.59■□□□□ 0.89
EXOSC4-201ENST00000316052 BAATQ14032 418 aaPredicted RBP20.59■□□□□ 0.89
EXOSC4-201ENST00000316052 TMEM240Q5SV17 173 aa20.59■□□□□ 0.89
EXOSC4-201ENST00000316052 IQSEC1Q6DN90 963 aa20.59■□□□□ 0.89
EXOSC4-201ENST00000316052 MORC4Q8TE76 937 aa20.59■□□□□ 0.89
EXOSC4-201ENST00000316052 CHD7Q9P2D1 2997 aa20.59■□□□□ 0.89
EXOSC4-201ENST00000316052 TTC28Q96AY4 2481 aa20.59■□□□□ 0.89
EXOSC4-201ENST00000316052 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.58■□□□□ 0.89
EXOSC4-201ENST00000316052 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.58■□□□□ 0.89
EXOSC4-201ENST00000316052 NFIBO00712 420 aa20.58■□□□□ 0.89
EXOSC4-201ENST00000316052 CSF2RAP15509 400 aa20.58■□□□□ 0.89
EXOSC4-201ENST00000316052 TICAM2Q86XR7 235 aa20.58■□□□□ 0.89
EXOSC4-201ENST00000316052 MAFAQ8NHW3 353 aaPredicted RBP20.58■□□□□ 0.89
EXOSC4-201ENST00000316052 COL25A1Q9BXS0 654 aaPredicted RBP20.58■□□□□ 0.89
EXOSC4-201ENST00000316052 PPP1R12CQ9BZL4 782 aa20.58■□□□□ 0.89
EXOSC4-201ENST00000316052 AP5M1Q9H0R1 490 aa20.58■□□□□ 0.89
EXOSC4-201ENST00000316052 TRIM6-TRIM34B2RNG4 842 aa20.57■□□□□ 0.88
EXOSC4-201ENST00000316052 ACRP10323 421 aa20.57■□□□□ 0.88
EXOSC4-201ENST00000316052 PDHBP11177 359 aa20.57■□□□□ 0.88
EXOSC4-201ENST00000316052 CYP2C18P33260 490 aa20.57■□□□□ 0.88
EXOSC4-201ENST00000316052 PPIGQ13427 754 aaKnown RBP eCLIP20.57■□□□□ 0.88
EXOSC4-201ENST00000316052 TBC1D10CQ8IV04 446 aa20.57■□□□□ 0.88
EXOSC4-201ENST00000316052 CLEC4DQ8WXI8 215 aa20.57■□□□□ 0.88
EXOSC4-201ENST00000316052 RILPL2Q969X0 211 aa20.57■□□□□ 0.88
EXOSC4-201ENST00000316052 ZMYM6O95789 1325 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 CCDC171Q6TFL3 1326 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 TMEM265A0A087WTH1 108 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 GRXCR1A8MXD5 290 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 TLR3O15455 904 aaKnown RBP20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 CABYRO75952 493 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 DNAJB2P25686 324 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 ITGA7Q13683 1181 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 GRIN2CQ14957 1233 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 AKNAD1Q5T1N1 836 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 RASIP1Q5U651 963 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 B4GALNT3Q6L9W6 998 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 KIAA1211Q6ZU35 1233 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 ZNF365Q70YC5 407 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 SMC5Q8IY18 1101 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 TMEM199Q8N511 208 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 VTA1Q9NP79 307 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 Q9Y3F1 56 aa20.56■□□□□ 0.88
EXOSC4-201ENST00000316052 ALDH5A1P51649 535 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms