RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 SCN7AQ01118 1682 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 LRRC10BA6NIK2 292 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 PDE2AO00408 941 aaPredicted RBP21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 CYP26C1Q6V0L0 522 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 CCNI2Q6ZMN8 369 aaPredicted RBP21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 NUP133Q8WUM0 1156 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 STAMQ92783 540 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 LIMA1Q9UHB6 759 aaKnown RBP21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 SUFUQ9UMX1 484 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 TNKSO95271 1327 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 GOLGA6BA6NDN3 693 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 SPAG1Q07617 926 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 BANK1Q8NDB2 785 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 TNFRSF25Q93038 417 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 JPH2Q9BR39 696 aaPredicted RBP21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 EIF3HO15372 352 aaKnown RBP eCLIP21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 FGRP09769 529 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 KRT9P35527 623 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 KRT31Q15323 416 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 CCDC82Q8N4S0 544 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 SYMPKQ92797 1274 aaKnown RBP21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 SHISA4Q96DD7 197 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 FAM212AQ96EL1 285 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 SAR1BQ9Y6B6 198 aa21.09■□□□□ 0.97
HERPUD2-201ENST00000311350 KIAA1551Q9HCM1 1747 aa21.08■□□□□ 0.97
HERPUD2-201ENST00000311350 N4BP3O15049 544 aa21.08■□□□□ 0.97
HERPUD2-201ENST00000311350 TRAPPC10P48553 1259 aa21.08■□□□□ 0.97
HERPUD2-201ENST00000311350 C2orf54Q08AI8 447 aa21.08■□□□□ 0.97
HERPUD2-201ENST00000311350 PPFIA1Q13136 1202 aa21.08■□□□□ 0.97
HERPUD2-201ENST00000311350 EPSTI1Q96J88 318 aa21.08■□□□□ 0.97
HERPUD2-201ENST00000311350 TAB2Q9NYJ8 693 aa21.08■□□□□ 0.97
HERPUD2-201ENST00000311350 DDAH1O94760 285 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 ATP2C1P98194 919 aaPredicted RBP21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 DONSONQ9NYP3 566 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 CTNND2Q9UQB3 1225 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 EPN1Q9Y6I3 576 aaPredicted RBP21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 DUOX1Q9NRD9 1551 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 CCDC152Q4G0S7 254 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 PARP10Q53GL7 1025 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 CATIPQ7Z7H3 387 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 CNPY4Q8N129 248 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 HDAC7Q8WUI4 952 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 ZSCAN10Q96SZ4 725 aaPredicted RBP21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 LRP2BPQ9P2M1 347 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 DLEC1Q9Y238 1755 aa21.07■□□□□ 0.96
HERPUD2-201ENST00000311350 NDUFA10O95299 355 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 KCNA3P22001 575 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 FKBP15Q5T1M5 1219 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 CMTR1Q8N1G2 835 aaKnown RBP21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 BRIP1Q9BX63 1249 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 ZNF804BA4D1E1 1349 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 PSMD14O00487 310 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 IGHMBP2P38935 993 aaKnown RBP21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 CLEC4GQ6UXB4 293 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 SND1Q7KZF4 910 aaKnown RBP eCLIP21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 CD248Q9HCU0 757 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 VPS54Q9P1Q0 977 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 RWDD2AQ9UIY3 292 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 BCS1LQ9Y276 419 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 LAMB2P55268 1798 aa21.06■□□□□ 0.96
HERPUD2-201ENST00000311350 SHTN1A0MZ66 631 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 CYP7A1P22680 504 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 BCAMP50895 628 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 HERVK_113P62684 666 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 ENAHQ8N8S7 591 aaPredicted RBP21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 PRPF38AQ8NAV1 312 aaKnown RBP21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 ARL8AQ96BM9 186 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 SETDB2Q96T68 719 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 GNL3LQ9NVN8 582 aaKnown RBP21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 MYH6P13533 1939 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 MAGEB6P1A0A0J9YX57 407 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 FNTAP49354 379 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 PDCLQ13371 301 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 TTC38Q5R3I4 469 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 JAKMIP2Q96AA8 810 aa21.05■□□□□ 0.96
HERPUD2-201ENST00000311350 NRXN2Q9P2S2 1712 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 TARSL2A2RTX5 802 aaKnown RBP21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 GTPBP6O43824 516 aaPredicted RBP21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 CHRNA5P30532 468 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 SEMA3FQ13275 785 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 CCDC122Q5T0U0 273 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 SUSD4Q5VX71 490 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 CAGE1Q8TC20 777 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 PIM2Q9P1W9 311 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 FAM205CA6NFA0 338 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 RGL2O15211 777 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 MCM3P25205 808 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 EARS2Q5JPH6 523 aaKnown RBP21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 IFIT1BQ5T764 474 aaKnown RBP21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 TMTC3Q6ZXV5 915 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 ANKRD18AQ8IVF6 992 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 RMND1Q9NWS8 449 aa21.04■□□□□ 0.96
HERPUD2-201ENST00000311350 RCCD1A6NED2 376 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 NPY5RQ15761 445 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 PAPD7Q5XG87 772 aaKnown RBP21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 AENQ8WTP8 325 aaKnown RBP21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 SH3GL2Q99962 352 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 RIOK1Q9BRS2 568 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms