RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 SRGAP1Q7Z6B7 1085 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 DHX58Q96C10 678 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 SHISA4Q96DD7 197 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 EPC1Q9H2F5 836 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 NFE2L3Q9Y4A8 694 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 SNED1Q8TER0 1413 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 CCDC175P0C221 793 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 ERCC5P28715 1186 aaPredicted RBP11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 NR5A1Q13285 461 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 CC2D2BQ6DHV5 1058 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 KANK3Q6NY19 840 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 RTKN2Q8IZC4 609 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 CEP112Q8N8E3 955 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 OXER1Q8TDS5 423 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 CEP95Q96GE4 821 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 TMEM47Q9BQJ4 181 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 MTFR1LQ9H019 292 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 CXorf56Q9H5V9 222 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 A0A1B0GTH6 734 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 DDTLA6NHG4 134 aaPredicted RBP11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 AKR1B1P15121 316 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 PTPREP23469 700 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 ADKP55263 362 aaKnown RBP11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 AKAP17AQ02040 695 aaKnown RBP11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 FMR1Q06787 632 aaKnown RBP eCLIP11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 FUT2Q10981 343 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 MCTP2Q6DN12 878 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 CCDC125Q86Z20 511 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 WASF1Q92558 559 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 ZDHHC15Q96MV8 337 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 ZCCHC17Q9NP64 241 aaKnown RBP11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 RAB21Q9UL25 225 aa11.61□□□□□ -0.55
APOBEC3F-201ENST00000308521 MYH1P12882 1939 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 NID2Q14112 1375 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 CLRN2A0PK11 232 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 AKR1B15C9JRZ8 316 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 PKN1Q16512 942 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 MSANTD4Q8NCY6 345 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 SUPT20HQ8NEM7 779 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 CCDC12Q8WUD4 166 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 NAV1Q8NEY1 1877 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 TRIM66O15016 1216 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 DEXIO95424 95 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 ACTN2P35609 894 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 ATP2B2Q01814 1243 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 DALRD3Q5D0E6 543 aaKnown RBP11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 TMTC3Q6ZXV5 915 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 NOSTRINQ8IVI9 506 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 SPATA20Q8TB22 786 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 CDC23Q9UJX2 597 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 FBXO2Q9UK22 296 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 ADAM21Q9UKJ8 722 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 LAMB1P07942 1786 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 COL4A5P29400 1685 aa11.6□□□□□ -0.55
APOBEC3F-201ENST00000308521 ROBO3Q96MS0 1386 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 SHTN1A0MZ66 631 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 FOXN1O15353 648 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 CHMP4BP1P59074 171 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 PTPN21Q16825 1174 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 DGKHQ86XP1 1220 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 DIS3L2Q8IYB7 885 aaKnown RBP11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.554e-8■■■■■ 39
APOBEC3F-201ENST00000308521 CCDC34Q96HJ3 373 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 MRPL44Q9H9J2 332 aaKnown RBP11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 DDAH1O94760 285 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 QSER1Q2KHR3 1735 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 USP17L2Q6R6M4 530 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 SH3BP5LQ7L8J4 393 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 PSMD1Q99460 953 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 ZNF287Q9HBT7 754 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 SERTAD1Q9UHV2 236 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
APOBEC3F-201ENST00000308521 FAM205CA6NFA0 338 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 TCP10L2B9ZVM9 353 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 ADAMTS3O15072 1205 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 MMP1P03956 469 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 TUBBP07437 444 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 CALM1P0DP23 149 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 CALM2P0DP24 149 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 CALM3P0DP25 149 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 GABPAQ06546 454 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 KARSQ15046 597 aaKnown RBP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 BEND6Q5SZJ8 279 aaPredicted RBP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 MMS22LQ6ZRQ5 1243 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 HDXQ7Z353 690 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 LRRC47Q8N1G4 583 aaKnown RBP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 NEDD1Q8NHV4 660 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 MED15Q96RN5 788 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 FOXP1Q9H334 677 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms