RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 MTA3Q9BTC8 594 aa18.56■□□□□ 0.56
SSH3-201ENST00000308127 HAUS4Q9H6D7 363 aa18.56■□□□□ 0.56
SSH3-201ENST00000308127 HPCAL4Q9UM19 191 aa18.56■□□□□ 0.56
SSH3-201ENST00000308127 CAPN11Q9UMQ6 739 aa18.56■□□□□ 0.56
SSH3-201ENST00000308127 PCDHA6Q9UN73 950 aa18.56■□□□□ 0.56
SSH3-201ENST00000308127 PCDHA8Q9Y5H6 950 aa18.56■□□□□ 0.56
SSH3-201ENST00000308127 BCL9LQ86UU0 1499 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 PSMD14O00487 310 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 LONP1P36776 959 aaKnown RBP18.55■□□□□ 0.56
SSH3-201ENST00000308127 TECP42680 631 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 TRIM14Q14142 442 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 FAM71BQ8TC56 605 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 NOC4LQ9BVI4 516 aaKnown RBP18.55■□□□□ 0.56
SSH3-201ENST00000308127 PCDHA4Q9UN74 947 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 MOCS3O95396 460 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 DYMQ7RTS9 669 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 CRNKL1Q9BZJ0 848 aaKnown RBP18.55■□□□□ 0.56
SSH3-201ENST00000308127 GBP3Q9H0R5 595 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 EXOC1Q9NV70 894 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 PSD3Q9NYI0 1048 aa18.55■□□□□ 0.56
SSH3-201ENST00000308127 PDS5AQ29RF7 1337 aaKnown RBP18.54■□□□□ 0.56
SSH3-201ENST00000308127 ENOX2Q16206 610 aaKnown RBP18.54■□□□□ 0.56
SSH3-201ENST00000308127 TMC4Q7Z404 712 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 FAM170AA1A519 330 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 CCNT1O60563 726 aaKnown RBP18.54■□□□□ 0.56
SSH3-201ENST00000308127 ADAMTS2O95450 1211 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 STIM1Q13586 685 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 GRIK5Q16478 980 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 CERS3Q8IU89 383 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 SELENOOQ9BVL4 669 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 KANSL2Q9H9L4 492 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 MYO1AQ9UBC5 1043 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 DMGDHQ9UI17 866 aaKnown RBP18.54■□□□□ 0.56
SSH3-201ENST00000308127 ANKRD36CQ5JPF3 1778 aa18.54■□□□□ 0.56
SSH3-201ENST00000308127 IPO7O95373 1038 aaKnown RBP18.53■□□□□ 0.56
SSH3-201ENST00000308127 NFRKBQ6P4R8 1299 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 C2CD5Q86YS7 1000 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 GJA10Q969M2 543 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 MKNK2Q9HBH9 465 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 LRP5O75197 1615 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 MYH10P35580 1976 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 KRT86O43790 486 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 CABP7Q86V35 215 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 GLIS3Q8NEA6 775 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 AFAP1L1Q8TED9 768 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 ZNHIT6Q9NWK9 470 aaKnown RBP18.53■□□□□ 0.56
SSH3-201ENST00000308127 CACNA1SQ13698 1873 aa18.53■□□□□ 0.56
SSH3-201ENST00000308127 WDR93Q6P2C0 686 aa18.52■□□□□ 0.56
SSH3-201ENST00000308127 GOLGA6L1Q8N7Z2 621 aa18.52■□□□□ 0.56
SSH3-201ENST00000308127 CRACR2AQ9BSW2 395 aa18.52■□□□□ 0.56
SSH3-201ENST00000308127 LRRC1Q9BTT6 524 aa18.52■□□□□ 0.56
SSH3-201ENST00000308127 MMRN2Q9H8L6 949 aa18.52■□□□□ 0.56
SSH3-201ENST00000308127 TRAPPC10P48553 1259 aa18.52■□□□□ 0.56
SSH3-201ENST00000308127 RNASE9P60153 205 aaKnown RBP18.52■□□□□ 0.56
SSH3-201ENST00000308127 LRRC41Q15345 812 aa18.52■□□□□ 0.56
SSH3-201ENST00000308127 PARP10Q53GL7 1025 aa18.52■□□□□ 0.56
SSH3-201ENST00000308127 SND1Q7KZF4 910 aaKnown RBP eCLIP18.52■□□□□ 0.56
SSH3-201ENST00000308127 GIMAP8Q8ND71 665 aaPredicted RBP18.52■□□□□ 0.56
SSH3-201ENST00000308127 SMARCC1Q92922 1105 aaPredicted RBP18.52■□□□□ 0.56
SSH3-201ENST00000308127 SRGNP10124 158 aa18.52■□□□□ 0.55
SSH3-201ENST00000308127 APBA1Q02410 837 aa18.52■□□□□ 0.55
SSH3-201ENST00000308127 TUBB2AQ13885 445 aa18.52■□□□□ 0.55
SSH3-201ENST00000308127 DZIP1Q86YF9 867 aaKnown RBP18.52■□□□□ 0.55
SSH3-201ENST00000308127 CCDC42Q96M95 316 aa18.52■□□□□ 0.55
SSH3-201ENST00000308127 TUBB2BQ9BVA1 445 aa18.52■□□□□ 0.55
SSH3-201ENST00000308127 BUB1O43683 1085 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 EEF1GP26641 437 aaKnown RBP18.51■□□□□ 0.55
SSH3-201ENST00000308127 KIF5BP33176 963 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 CYLC1P35663 651 aaPredicted RBP18.51■□□□□ 0.55
SSH3-201ENST00000308127 DNM2P50570 870 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 UBE4AQ14139 1066 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 PTPROQ16827 1216 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
SSH3-201ENST00000308127 P2RX5Q93086 422 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 TMEM260Q9NX78 707 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 MAD2L2Q9UI95 211 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 PLCH1Q4KWH8 1693 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 ZC3H4Q9UPT8 1303 aaKnown RBP18.51■□□□□ 0.55
SSH3-201ENST00000308127 AGPSO00116 658 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 CALML3P27482 149 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 TXKP42681 527 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 KRT83P78385 493 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 KIF5AQ12840 1032 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 MIIPQ5JXC2 388 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 ARL6IP4Q66PJ3 421 aaKnown RBP18.51■□□□□ 0.55
SSH3-201ENST00000308127 MAPKAPK5Q8IW41 473 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 SECISBP2LQ93073 1101 aaKnown RBP18.51■□□□□ 0.55
SSH3-201ENST00000308127 TTYH3Q9C0H2 523 aa18.51■□□□□ 0.55
SSH3-201ENST00000308127 BIN2Q9UBW5 565 aaPredicted RBP18.51■□□□□ 0.55
SSH3-201ENST00000308127 DISP2A7MBM2 1401 aa18.5■□□□□ 0.55
SSH3-201ENST00000308127 ORC4O43929 436 aa18.5■□□□□ 0.55
SSH3-201ENST00000308127 PRPF6O94906 941 aaKnown RBP18.5■□□□□ 0.55
SSH3-201ENST00000308127 FGRP09769 529 aa18.5■□□□□ 0.55
SSH3-201ENST00000308127 HIBADHP31937 336 aaKnown RBP18.5■□□□□ 0.55
SSH3-201ENST00000308127 PAPD7Q5XG87 772 aaKnown RBP18.5■□□□□ 0.55
SSH3-201ENST00000308127 USP17L2Q6R6M4 530 aa18.5■□□□□ 0.55
SSH3-201ENST00000308127 TGFBRAP1Q8WUH2 860 aa18.5■□□□□ 0.55
SSH3-201ENST00000308127 TRIM9Q9C026 710 aa18.5■□□□□ 0.55
SSH3-201ENST00000308127 DEF6Q9H4E7 631 aa18.5■□□□□ 0.55
SSH3-201ENST00000308127 THAP9Q9H5L6 903 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms