RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 RHOBTB3O94955 611 aa22.49■■□□□ 1.19
CXCL16-201ENST00000293778 COPB1P53618 953 aaKnown RBP22.49■■□□□ 1.19
CXCL16-201ENST00000293778 ZNF543Q08ER8 600 aa22.49■■□□□ 1.19
CXCL16-201ENST00000293778 CCDC93Q567U6 631 aa22.49■■□□□ 1.19
CXCL16-201ENST00000293778 H7C1D1 291 aa22.49■■□□□ 1.19
CXCL16-201ENST00000293778 MFAP3LO75121 409 aa22.49■■□□□ 1.19
CXCL16-201ENST00000293778 TECP42680 631 aa22.49■■□□□ 1.19
CXCL16-201ENST00000293778 FLAD1Q8NFF5 587 aa22.49■■□□□ 1.19
CXCL16-201ENST00000293778 NAA15Q9BXJ9 866 aaKnown RBP22.49■■□□□ 1.19
CXCL16-201ENST00000293778 VPS16Q9H269 839 aa22.49■■□□□ 1.19
CXCL16-201ENST00000293778 STIM1Q13586 685 aa22.48■■□□□ 1.19
CXCL16-201ENST00000293778 POTEDQ86YR6 584 aa22.48■■□□□ 1.19
CXCL16-201ENST00000293778 TAB2Q9NYJ8 693 aa22.48■■□□□ 1.19
CXCL16-201ENST00000293778 CGNQ9P2M7 1197 aaKnown RBP22.48■■□□□ 1.19
CXCL16-201ENST00000293778 MPHOSPH10O00566 681 aaKnown RBP22.47■■□□□ 1.19
CXCL16-201ENST00000293778 APBA3O96018 575 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 CRKP46108 304 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 GIMAP8Q8ND71 665 aaPredicted RBP22.47■■□□□ 1.19
CXCL16-201ENST00000293778 ZNF622Q969S3 477 aaKnown RBP eCLIP22.47■■□□□ 1.19
CXCL16-201ENST00000293778 DBNDD1Q9H9R9 158 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 JMJD4Q9H9V9 463 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.47■■□□□ 1.19
CXCL16-201ENST00000293778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.47■■□□□ 1.19
CXCL16-201ENST00000293778 V9GYY5 206 aaPredicted RBP22.47■■□□□ 1.19
CXCL16-201ENST00000293778 PNMA6FA0A0J9YX94 578 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 TPM1P09493 284 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 CASP14P31944 242 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 NFIAQ12857 509 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 PODNQ7Z5L7 613 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 CREBRFQ8IUR6 639 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 CNGA4Q8IV77 575 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 ADGRF4Q8IZF3 695 aa22.47■■□□□ 1.19
CXCL16-201ENST00000293778 TRIM49BA6NDI0 452 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 SOWAHDA6NJG2 315 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 GYPCP04921 128 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 PPP1R18Q6NYC8 613 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 CCDC51Q96ER9 411 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 DESI2Q9BSY9 194 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 PSMA7O14818 248 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 TXKP42681 527 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 ATP2B2Q01814 1243 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 MTF1Q14872 753 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 CCDC47Q96A33 483 aaKnown RBP22.46■■□□□ 1.19
CXCL16-201ENST00000293778 EHD4Q9H223 541 aa22.46■■□□□ 1.19
CXCL16-201ENST00000293778 CALCRLQ16602 461 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 GPATCH4Q5T3I0 446 aaKnown RBP22.45■■□□□ 1.18
CXCL16-201ENST00000293778 CALML4Q96GE6 196 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 ZDHHC15Q96MV8 337 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 MTMR9Q96QG7 549 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 MMTAG2Q9BU76 263 aaKnown RBP22.45■■□□□ 1.18
CXCL16-201ENST00000293778 TRIM9Q9C026 710 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 KCNQ5Q9NR82 932 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 FANCGO15287 622 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 CCDC175P0C221 793 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 FXR1P51114 621 aaKnown RBP eCLIP22.45■■□□□ 1.18
CXCL16-201ENST00000293778 PMS1P54277 932 aaKnown RBP22.45■■□□□ 1.18
CXCL16-201ENST00000293778 CCDC96Q2M329 555 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 MSL1Q68DK7 614 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 TTBK2Q6IQ55 1244 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 IRF2BP1Q8IU81 584 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 CCDC17Q96LX7 622 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 C7orf25Q9BPX7 421 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 RIC8AQ9NPQ8 531 aa22.45■■□□□ 1.18
CXCL16-201ENST00000293778 GNG11P61952 73 aa22.44■■□□□ 1.18
CXCL16-201ENST00000293778 ELF2Q15723 593 aa22.44■■□□□ 1.18
CXCL16-201ENST00000293778 RAD9BQ6WBX8 426 aa22.44■■□□□ 1.18
CXCL16-201ENST00000293778 ZFPM1Q8IX07 1006 aa22.44■■□□□ 1.18
CXCL16-201ENST00000293778 GREB1LQ9C091 1923 aaPredicted RBP22.43■■□□□ 1.18
CXCL16-201ENST00000293778 AMPD3Q01432 767 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 C2CD5Q86YS7 1000 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 KIAA0825Q8IV33 1275 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 DHTKD1Q96HY7 919 aaPredicted RBP22.43■■□□□ 1.18
CXCL16-201ENST00000293778 TRIM47Q96LD4 638 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 THAP9Q9H5L6 903 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 EXOC1Q9NV70 894 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 LRWD1Q9UFC0 647 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 SLC37A4O43826 429 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 PPP1R11O60927 126 aaPredicted RBP22.43■■□□□ 1.18
CXCL16-201ENST00000293778 URI1O94763 535 aaPredicted RBP22.43■■□□□ 1.18
CXCL16-201ENST00000293778 TDP2O95551 362 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 EEF1GP26641 437 aaKnown RBP22.43■■□□□ 1.18
CXCL16-201ENST00000293778 TNNI2P48788 182 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 FXR2P51116 673 aaKnown RBP eCLIP22.43■■□□□ 1.18
CXCL16-201ENST00000293778 ASIC1P78348 528 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 PDE4DQ08499 809 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 TRIM14Q14142 442 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 TMEM266Q2M3C6 531 aa22.43■■□□□ 1.18
CXCL16-201ENST00000293778 SLURP2P0DP57 97 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 SLC16A2P36021 539 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 UBXN1Q04323 297 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 KCTD1Q719H9 257 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 SRRTQ9BXP5 876 aaKnown RBP22.42■■□□□ 1.18
CXCL16-201ENST00000293778 ADGRG1Q9Y653 693 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 EDIL3O43854 480 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 FECHP22830 423 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 CASQ1P31415 396 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 STRIP1Q5VSL9 837 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 TTI2Q6NXR4 508 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 MRIQ9BWK5 157 aa22.42■■□□□ 1.18
CXCL16-201ENST00000293778 DNAJC18Q9H819 358 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms