RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 TACO1Q9BSH4 297 aaKnown RBP12.57□□□□□ -0.4
USP53-201ENST00000274030 BEGAINQ9BUH8 593 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 BAIAP2L1Q9UHR4 511 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 SPDYE16A6NNV3 312 aaPredicted RBP12.57□□□□□ -0.4
USP53-201ENST00000274030 DDAH1O94760 285 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 DMP1Q13316 513 aaPredicted RBP12.57□□□□□ -0.4
USP53-201ENST00000274030 UBE3CQ15386 1083 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 SPDYE2Q495Y8 402 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 APOA5Q6Q788 366 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 CSRNP1Q96S65 589 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 RABGAP1Q9Y3P9 1069 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 BLMP54132 1417 aaPredicted RBP12.57□□□□□ -0.4
USP53-201ENST00000274030 TMOD1P28289 359 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 BIRC2Q13490 618 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 AFAP1L2Q8N4X5 818 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 CNOT6LQ96LI5 555 aaKnown RBP12.57□□□□□ -0.4
USP53-201ENST00000274030 FEZ2Q9UHY8 353 aaPredicted RBP12.57□□□□□ -0.4
USP53-201ENST00000274030 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 CYP2D7A0A087X1C5 515 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 H2AFZP0C0S5 128 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 GNGT1P63211 74 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 TTC19Q6DKK2 380 aaPredicted RBP12.57□□□□□ -0.4
USP53-201ENST00000274030 C4orf50Q6ZRC1 276 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 H2AFVQ71UI9 128 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 RIC8AQ9NPQ8 531 aa12.57□□□□□ -0.4
USP53-201ENST00000274030 EPN1Q9Y6I3 576 aaPredicted RBP12.57□□□□□ -0.4
USP53-201ENST00000274030 YWHAEP62258 255 aaKnown RBP12.56□□□□□ -0.4
USP53-201ENST00000274030 NR5A1Q13285 461 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 ZMYM1Q5SVZ6 1142 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 MAIP1Q8WWC4 291 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 ADPGKQ9BRR6 497 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 SPC25Q9HBM1 224 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 PLCB1Q9NQ66 1216 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 PTPN22Q9Y2R2 807 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 WHAMMP3Q1A5X7 153 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 CCDC13Q8IYE1 715 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 CCDC170Q8IYT3 715 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 HACE1Q8IYU2 909 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 NME8Q8N427 588 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 MEIS1O00470 390 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 COPB1P53618 953 aaKnown RBP12.56□□□□□ -0.4
USP53-201ENST00000274030 ETF1P62495 437 aaKnown RBP12.56□□□□□ -0.4
USP53-201ENST00000274030 EXOC3L4Q17RC7 722 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 Q3C1V9 767 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 LRCH2Q5VUJ6 765 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 TUBGCP2Q9BSJ2 902 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 NUF2Q9BZD4 464 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 VCX3BQ9H321 246 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 DISC1Q9NRI5 854 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 PYCARDQ9ULZ3 195 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 TRIM37O94972 964 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 MESDQ14696 234 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 FAM196AQ6ZSG2 479 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 ATP2A3Q93084 1043 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 PLEKHF1Q96S99 279 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 ZNF148Q9UQR1 794 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
USP53-201ENST00000274030 RBM6P78332 1123 aaKnown RBP12.56□□□□□ -0.4
USP53-201ENST00000274030 DPCR1Q3MIW9 517 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 NXNQ6DKJ4 435 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 CROCCP2Q86T23 111 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 UBE2Q2Q8WVN8 375 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 SEPT9Q9UHD8 586 aaPredicted RBP12.56□□□□□ -0.4
USP53-201ENST00000274030 ATP7AQ04656 1500 aa12.56□□□□□ -0.4
USP53-201ENST00000274030 GBP1P32455 592 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 HADHQ16836 314 aaKnown RBP12.55□□□□□ -0.4
USP53-201ENST00000274030 DCAF15Q66K64 600 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 SULF1Q8IWU6 871 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 COA7Q96BR5 231 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 HESX1Q9UBX0 185 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 ABCC2Q92887 1545 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 CLIC2O15247 247 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 CSPG5O95196 566 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 LONP1P36776 959 aaKnown RBP12.55□□□□□ -0.4
USP53-201ENST00000274030 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 PUS7LQ9H0K6 701 aaKnown RBP12.55□□□□□ -0.4
USP53-201ENST00000274030 PARP2Q9UGN5 583 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 SOS2Q07890 1332 aaPredicted RBP12.55□□□□□ -0.4
USP53-201ENST00000274030 CTTNBP2Q8WZ74 1663 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 THAP12O43422 761 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 RNF40O75150 1001 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 ZMYND10O75800 440 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 PIK3CAP42336 1068 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 AMNQ9BXJ7 453 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 GUCY2DQ02846 1103 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 TTBK2Q6IQ55 1244 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 DCLK2Q8N568 766 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 TRIML1Q8N9V2 468 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 DYNLL2Q96FJ2 89 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 MAD1L1Q9Y6D9 718 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 INSRP06213 1382 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 LRRN2O75325 713 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 NR2F2P24468 414 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 ADCY1Q08828 1119 aa12.55□□□□□ -0.4
USP53-201ENST00000274030 CUL4BQ13620 913 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms