RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 STAT6P42226 847 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 KLK7P49862 253 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 HAUS3Q68CZ6 603 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 RNF217Q8TC41 542 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 ZNF473Q8WTR7 871 aaKnown RBP16.66■□□□□ 0.26
XRCC1-201ENST00000262887 TNFRSF25Q93038 417 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 SGSM3Q96HU1 749 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 CCDC42Q96M95 316 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 PSMB7Q99436 277 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 TUBGCP2Q9BSJ2 902 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 KLC4Q9NSK0 619 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 PLEKHA8P1O95397 391 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 GNAT2P19087 354 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 SMTNP53814 917 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 GUCY1A3Q02108 690 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 ACTN3Q08043 901 aaPredicted RBP16.65■□□□□ 0.26
XRCC1-201ENST00000262887 RETREG2Q8NC44 543 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 OSBPL9Q96SU4 736 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 SOS2Q07890 1332 aaPredicted RBP16.65■□□□□ 0.26
XRCC1-201ENST00000262887 PSMA7O14818 248 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 APBA1Q02410 837 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 TBC1D8BQ0IIM8 1120 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 TRIM28Q13263 835 aaKnown RBP16.65■□□□□ 0.26
XRCC1-201ENST00000262887 PLCB4Q15147 1175 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 PPP2R5AQ15172 486 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 IL17AQ16552 155 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 FKBP15Q5T1M5 1219 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 PIK3AP1Q6ZUJ8 805 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 KRT26Q7Z3Y9 468 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 MCM8Q9UJA3 840 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 SPATA31A3Q5VYP0 1347 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 TCP1P17987 556 aaKnown RBP16.65■□□□□ 0.26
XRCC1-201ENST00000262887 FUT2Q10981 343 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 SEC23AQ15436 765 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 PTGISQ16647 500 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 CCDC40Q4G0X9 1142 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 CFAP58Q5T655 872 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 C8orf74Q6P047 294 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 NFRKBQ6P4R8 1299 aa16.65■□□□□ 0.26
XRCC1-201ENST00000262887 ZNF263O14978 683 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 PPP1R37O75864 691 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 CXCR5P32302 372 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 NPY5RQ15761 445 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 PREPLQ4J6C6 727 aaPredicted RBP16.64■□□□□ 0.25
XRCC1-201ENST00000262887 ESR2Q92731 530 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 EEF2KMTQ96G04 330 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 CCDC43Q96MW1 224 aaKnown RBP16.64■□□□□ 0.25
XRCC1-201ENST00000262887 IFIH1Q9BYX4 1025 aaKnown RBP16.64■□□□□ 0.25
XRCC1-201ENST00000262887 SMARCAL1Q9NZC9 954 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 HYOU1Q9Y4L1 999 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 TRPM3Q9HCF6 1732 aaPredicted RBP16.64■□□□□ 0.25
XRCC1-201ENST00000262887 MYH2Q9UKX2 1941 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 RASSF10A6NK89 507 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 MINDY4BA8MYZ0 360 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 MOCS3O95396 460 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 ELF1P32519 619 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
XRCC1-201ENST00000262887 RASSF8Q8NHQ8 419 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 MLXIPQ9HAP2 919 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 POLD4Q9HCU8 107 aa16.64■□□□□ 0.25
XRCC1-201ENST00000262887 RASSF9O75901 435 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 NR1D1P20393 614 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 NF2P35240 595 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 PAFAH1B1P43034 410 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 EMC10Q5UCC4 262 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 KIF6Q6ZMV9 814 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 CATIPQ7Z7H3 387 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 NLRP14Q86W24 1093 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 CCDC13Q8IYE1 715 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 IQCKQ8N0W5 287 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 CSGALNACT2Q8N6G5 542 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 MIGA1Q8NAN2 632 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 CABLES1Q8TDN4 633 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 ALS2CR12Q96Q35 445 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 CCT8L2Q96SF2 557 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 EHD2Q9NZN4 543 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 GGA2Q9UJY4 613 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 ZNF233A6NK53 670 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 SCP2P22307 547 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 CTSWP56202 376 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 CDK17Q00537 523 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 RASGRF1Q13972 1273 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 HELBQ8NG08 1087 aaPredicted RBP16.63■□□□□ 0.25
XRCC1-201ENST00000262887 MYCBPAPQ8TBZ2 947 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 LPIN2Q92539 896 aa16.63■□□□□ 0.25
XRCC1-201ENST00000262887 PLEKP08567 350 aaPredicted RBP16.62■□□□□ 0.25
XRCC1-201ENST00000262887 CDR1P51861 262 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 IFT88Q13099 833 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 PUM3Q15397 648 aaKnown RBP16.62■□□□□ 0.25
XRCC1-201ENST00000262887 CHRNA2Q15822 529 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 GLE1Q53GS7 698 aaKnown RBP16.62■□□□□ 0.25
XRCC1-201ENST00000262887 IFIT1BQ5T764 474 aaKnown RBP16.62■□□□□ 0.25
XRCC1-201ENST00000262887 TTI2Q6NXR4 508 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 IFT20Q8IY31 132 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 ENAHQ8N8S7 591 aaPredicted RBP16.62■□□□□ 0.25
XRCC1-201ENST00000262887 NOC3LQ8WTT2 800 aaKnown RBP16.62■□□□□ 0.25
XRCC1-201ENST00000262887 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
XRCC1-201ENST00000262887 ZNF335Q9H4Z2 1342 aaPredicted RBP16.62■□□□□ 0.25
XRCC1-201ENST00000262887 LONP1P36776 959 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms